Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00850 ATGCCCCACCTCTCACGCGTTCCCGGCGTTCTCTCTACTGGGGATGTGCTCCGGTGGCTCGCGGCGAACTCTACTCGGCGGCTGGACATAATTGCTCAGTATTGGCAGCTGGTGGCTTCTCCTCATGATTCTCGTTCTGGAGATTATGGCTACTCCGAAAGTGATATGCGTAAATTTGGTGCCCCTGAAGGTGCTGCTGTTTATAAAGCCATCGATGCTGCTGCTGATCGTAATGTTAAAATCAGGTTGCTGTCTCACTCGGGAGTATATCCAGACTTCACCACAGAACCATGTCAGCTTGCTTCGGGAAGGTCAAATGTTAAGAATGTGACCTTGTTACTGGGAGATTGGTGGGGTTCGGGCATTGTTCATGCCAAAGTCTGGATATCAGATAATCGGGACGTATATATTGGATCCGCAAACAATGATTGGAAATCTCTTACTCAGGTTAAGGAAGTTGGAATCTATCTTACTGGTTGCCCAGGAATAGCTGAAAGGGTTGAAGTCTACTTCAACAATTTATGGAGACTTGCATCTCTTAATTCTTCAGCTTACACCAAAAGAATATTTGATCAACAGTGGCAAGTTGAAAGAAAGGTTCCTTGCTGGTCTCATTTCATTGACCCAAAACAGAGATGCAAGTCTCCACTTCCTCAGTATGTAAAGACTCCCCATGTTACAGGATATCCTGTTCTTTCTGATCCCTATATGTTTGAAGTTTCAATTGAGACTCCTGGAAGTAACCGTTCAACAAATCTTCCACAAGCTAGCTATCTCTCCTTTGCTCCTCCTGAGCTGTCATTTGGCAAGTATCAGGCTGATGAACAGGCTTGGGTTGATACAATTAAATCTGTTGGAATGAACGAGATAGTAAGAATCAACACCATGGACTGGTTGGGTCAGTCACAATATACTGACCAAACTATTTACTGGTCATCCCTGTCCTCTACGATATCAGAGGTTGTGTTTTCCAAGCATGCAACTGTAAAAATATTGGTGGCATATTGGAGTCATTTCATCAATGGCACAGATGTGTACTTGAAGTCTCTCCTCTACTCCAACAATCTGTGCTCATCTTCAAAGTACAATAAATGCTCTGGAAAAGTTGAGATCAAGTACTATATGGTTCCAGGTTTCAATTCAACAGGGCCTGCCATTAAGGACGGAGCCAGTACAGGAAATACATACCCCGGTTATACGAGGGTCAATCATGGAAAATATGCAGTTTCTGACGTACGGGCTCACATTGGAACGAGCAATCTCATATGGGACTACTTTTATACCACATCAGGAGTCAGCTTTGGAACACACAATCCTGCCATTGTGTCACAACTTCAGCAGATTTTTGATGCTGACTGGCATTCACCTTACTCTGTCCCTGTTGAAAAACTGGAACAACGCCTTTCTTCTTCATTCTAG 1419 0.439 MPHLSRVPGVLSTGDVLRWLAANSTRRLDIIAQYWQLVASPHDSRSGDYGYSESDMRKFGAPEGAAVYKAIDAAADRNVKIRLLSHSGVYPDFTTEPCQLASGRSNVKNVTLLLGDWWGSGIVHAKVWISDNRDVYIGSANNDWKSLTQVKEVGIYLTGCPGIAERVEVYFNNLWRLASLNSSAYTKRIFDQQWQVERKVPCWSHFIDPKQRCKSPLPQYVKTPHVTGYPVLSDPYMFEVSIETPGSNRSTNLPQASYLSFAPPELSFGKYQADEQAWVDTIKSVGMNEIVRINTMDWLGQSQYTDQTIYWSSLSSTISEVVFSKHATVKILVAYWSHFINGTDVYLKSLLYSNNLCSSSKYNKCSGKVEIKYYMVPGFNSTGPAIKDGASTGNTYPGYTRVNHGKYAVSDVRAHIGTSNLIWDYFYTTSGVSFGTHNPAIVSQLQQIFDADWHSPYSVPVEKLEQRLSSSF 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00850 472 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 399 425 IPR001736 GO:0003824
Accr4g00850 472 Pfam PLD-like domain 65 175 IPR025202 -
Accr4g00850 472 Gene3D Endonuclease Chain A 272 455 - -
Accr4g00850 472 Gene3D Endonuclease Chain A 12 179 - -
Accr4g00850 472 SUPERFAMILY Phospholipase D/nuclease 19 177 - -
Accr4g00850 472 CDD PLDc_vPLD3_4_5_like_2 258 454 - -
Accr4g00850 472 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 119 146 IPR001736 GO:0003824
Accr4g00850 472 SMART pld_4 119 146 IPR001736 GO:0003824
Accr4g00850 472 SMART pld_4 399 425 IPR001736 GO:0003824
Accr4g00850 472 PANTHER PHOSPHOLIPASE D - RELATED 1 467 - -
Accr4g00850 472 SUPERFAMILY Phospholipase D/nuclease 292 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00850 Accr-Chr4 8013785 8017475 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00850 K16860 - jre:109005216 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00850 4 8013785 8017475 Accr4g00850 4 8013785 8017475 ECH