Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00842 ATGTCAATACTGCAGAAAGGCGATTCCGTTCAAATCAGGGAGGTTTGGAAGGACAATCTTGAAGAAGAGTTTGCATTGATCCGTGAAATTGTTGACGAATATAGTTACATCGCCATGGACACGGAGTTCCCCGGAGTGGTTCTTAGGCCTGTGGGTAATTTTAAAAATATCAGTGAATATAACTATCAAACACTGAAGGATAACGTTGATATGCTGAAGTTGATCCAATTGGGCCTCACCTTCTCCGATGAGCGTGGAAATCTTCCTACTTGCGGCACTGACAAATGTTGCATTTGGCAGTTTAACTTTCGCGAGTTTAACGTTGGTGAAGACATCTTTGCGAGTGATTCAATTGAACTACTCCGCCAATGTGGAATTGATTTTAAGAAGAACAATGAGAAGGGTATTGACGTGAACCGATTTGGCGAGCTTCTGATGTCTTCAGGGGTGGTGCTGAACAATGAAGTCCATTGGGTCACATTTCATAGCGGTTATGATTTTGGTTACCTCCTCAAGTTATTGACCTGCCGTAGCTTGCCTGATACACAATCGGGATTCTTTACTTTGATCAACATATACTTCCCTACGGTGTATGATATCAAGCATCTGATGAAGTTCTGCAACAGCCTCCATGGTGGATTGAACAAACTTGCCGAATTGTTGGAAGTTGAGAGGATTGGTGCTTGCCATCAAGCCGGGTCCGATAGCTTACTCACGTCTTGTACATTTAGAAAGTTAAGGGATGTGTTCTTCAATGGCTCGACAGAGAAGTATTCTGGTGTCTTGTATGGGTTAGGTGTCGAAAATGGACAGGCTAATTGA 822 0.4294 MSILQKGDSVQIREVWKDNLEEEFALIREIVDEYSYIAMDTEFPGVVLRPVGNFKNISEYNYQTLKDNVDMLKLIQLGLTFSDERGNLPTCGTDKCCIWQFNFREFNVGEDIFASDSIELLRQCGIDFKKNNEKGIDVNRFGELLMSSGVVLNNEVHWVTFHSGYDFGYLLKLLTCRSLPDTQSGFFTLINIYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERIGACHQAGSDSLLTSCTFRKLRDVFFNGSTEKYSGVLYGLGVENGQAN 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00842 273 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 10 266 IPR039637 GO:0004535|GO:0030014
Accr4g00842 273 Gene3D - 1 269 IPR036397 GO:0003676
Accr4g00842 273 SUPERFAMILY Ribonuclease H-like 12 265 IPR012337 -
Accr4g00842 273 Pfam CAF1 family ribonuclease 15 136 IPR006941 -
Accr4g00842 273 FunFam Putative CCR4-associated factor 1 7 2 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00842 Accr-Chr4 7887703 7888524 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00842 K12581 - mnt:21397606 516.924