Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00808 ATGGGCTTCATCAGTGGCATGATCATGGGCATGGCCTTCGGATTCACTTTGATGTTCGCTTTTTCTCGCTTCCAAAGTTACCGATCCAAACGTCGTTCCCTTTTGGCGGAGGCCATAGCAGCTTTAGCCAGGATGAACACGATTGAAGATTCTAGTAGAATTATCCCACCAGAATGCTGTCCTCCCTGGTTAGATTGGCTCAATACCCATCTCCAGAAAATCTGGCCTTATGTTAATGAGGCAGCATCAGAGATGATAAGAAGCAATGTGGAGCCCATTCTTGAGAATTACACTCCCAAAATCTTGTCTTCAATCACATTTTCCAAGTTGACTCTTGGTACCGTGGCACCTCAATTCACAGGAGTGGCGATTGTTGAAGCAGAAAGTGGGGCTGATGGAGTGACTATGGAATTGGAGATGCAATGGGATGGTAACCCTTCTATTGCATTTGATGTTAAAACTCGAGTTGGCGTTGTGATACCTGTTAAGGTCAAAGATATTGGATTCACTGGCGTTTTCAGGCTGATCTTCAAACCATTAGTAGATGAGTTCCCTTCTTTTGGAGCTGTTTGTTATTCCTTGAGAGAAAAGAAACATCTAGACTTTACTCTTAAGGTTTCTGGCGGTGATATCTCAACTCTCCCAGGCGTATCCGATGCTATAGAGGAAACAATTCGAGATGCTATTGAGGATTCTATAACCTGGCCAATTCGTAAAATTATACCAATTCTACCAGACGATTACAGCTTCCTTGAGTTAAAACCAGTTGGAACACTAGAAGTAAAACTAGTGCAAGCAAAAGACTTGGCAAATAAAGATCTGATAGGAAAATCCGATCCTTTTGCGGTTTTATTTGTACGTCCAATTCGTGACAGAGTCCAAACCAGCAAAACAATCAACAACGAGTTGAATCCATTATGGAACGAGAACTTCGAGTTCCTTGTTGAAGATGCGTCAACTCAGCACTTGACTGTAAGAATATTTGATGATGAAGGCGTTGGAGCTGATCAGCTCATTGGGTGTACCCTGGTGCCATTAAAGGACCTTCAACCTGGAAAAGTTCAGACTTTTTGGTTGAAACTGGTCAAGGATTTGGATGTCCAAAGAGATCAAAAATACAGGGGTGAGGTGCATTTGGAGTTATTGTACTGTCCATTTGGTGTTGAAAGCATCTTTACAAACCTGTCTAGTGGTAGCTTCGGGTTGACCACTTTCGAGAAGACTTTAAAGAGATCCTCTGATCTGACACAGAGTGGTGATGTTAACAAATCACAGAAAAAATATGTGATAGTACGAGGAGTACTGTCTGTGACAGTGATATCAGCTGAAGACCTACCAGATACAGACTTACTGGGCAAAATTAACGCTTATGTTGTGCTCATGTTGAAGAAAGCAGATCAAAAACACAGGACCAGGGTTGCAACTTCAGGGCTAAACCCTGTTTGGAATCAAACATTTGACTTCGTTGTGGAGGATGCATTGCATGAAATGTTAATGCTCGAAGTCTGGGATCAAAATCTCATCGGGCAGGACAAAATTGGGAGAGTGACCATGACACTGACTCGGGTTATCCTAGAAAAGGAAGTTCAGGACAGTTTTGCGTTAGATGGGGCTAAATCTGGAAAACTTAACCTGCATCTTCAGTGGACTCCACATCACATATATCGAGATCCCTGA 1677 0.4252 MGFISGMIMGMAFGFTLMFAFSRFQSYRSKRRSLLAEAIAALARMNTIEDSSRIIPPECCPPWLDWLNTHLQKIWPYVNEAASEMIRSNVEPILENYTPKILSSITFSKLTLGTVAPQFTGVAIVEAESGADGVTMELEMQWDGNPSIAFDVKTRVGVVIPVKVKDIGFTGVFRLIFKPLVDEFPSFGAVCYSLREKKHLDFTLKVSGGDISTLPGVSDAIEETIRDAIEDSITWPIRKIIPILPDDYSFLELKPVGTLEVKLVQAKDLANKDLIGKSDPFAVLFVRPIRDRVQTSKTINNELNPLWNENFEFLVEDASTQHLTVRIFDDEGVGADQLIGCTLVPLKDLQPGKVQTFWLKLVKDLDVQRDQKYRGEVHLELLYCPFGVESIFTNLSSGSFGLTTFEKTLKRSSDLTQSGDVNKSQKKYVIVRGVLSVTVISAEDLPDTDLLGKINAYVVLMLKKADQKHRTRVATSGLNPVWNQTFDFVVEDALHEMLMLEVWDQNLIGQDKIGRVTMTLTRVILEKEVQDSFALDGAKSGKLNLHLQWTPHHIYRDP 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00808 558 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 60 244 IPR031468 GO:0008289
Accr4g00808 558 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 427 552 IPR035892 -
Accr4g00808 558 FunFam Extended synaptotagmin-2 412 553 - -
Accr4g00808 558 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 549 IPR045050 GO:0008289
Accr4g00808 558 CDD C2 435 531 - -
Accr4g00808 558 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 255 386 IPR035892 -
Accr4g00808 558 Pfam C2 domain 433 531 IPR000008 -
Accr4g00808 558 Pfam C2 domain 257 361 IPR000008 -
Accr4g00808 558 ProSiteProfiles C2 domain profile. 411 533 IPR000008 -
Accr4g00808 558 CDD SMP_SYT 61 243 - -
Accr4g00808 558 Gene3D C2 domain 253 390 IPR035892 -
Accr4g00808 558 ProSiteProfiles C2 domain profile. 236 359 IPR000008 -
Accr4g00808 558 SMART C2_3c 258 358 IPR000008 -
Accr4g00808 558 SMART C2_3c 434 532 IPR000008 -
Accr4g00808 558 Gene3D C2 domain 414 551 IPR035892 -
Accr4g00808 558 CDD C2 259 361 - -
Accr4g00808 558 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 65 243 IPR039010 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00808 Accr-Chr4 7656198 7659266 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00808 435 523 Lipid Metabolism Gene Families AT1G51570 34.831 8.39e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00808 - - gmx:100787972 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00808 4 7656198 7659266 Accr4g00808 4 7656198 7659266 ECH