Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00805 ATGAAGCACACTTCGCCTGAGGCTGCTCCATCTTTATCTTCTGCACCCTCTTCAACAACGGACCAGTCACATGTTGCCACTCCATCGTCGTCGTCGGCTTCGCTGGACAAACCTGTTTTAGGTTCGTCCGCCGCTGCTCAGGAGGATCTGGCTATAGGGTCTAGGGACGGAGGCGGCGCCCAGCAGTCCGTGACCATCGAACGCCGGGGCGACTACTCGGCCGTTTGCCGATGGACAGTTTACAATTTTCCACGGATAAAAGGTAGGGCGCTATGGAGCAAGTACTTTGAGGTCGGAGGTTATGATTGCCGTCTCTTGATATACCCCAAGGGTGACTCTCAGGCCTTGCCTGGGTATATCTCTATCTACCTCCAAATCATGGACCCTGGGGCCACTTCCTCGTCCAAATGGGACTGTTTTGCTAGCTACCGTTTGGCAATCGTGAATGTCGCCGACGATTCTAAGACCATTCATCGGGATTCGTGGCATCGGTTCTCAAGCAAGAAGAAATCACACGGGTGGTGTGATTTCACGCCCTCTACAACTGTATTGGATCCCAAATTGGGCTACTTATTTAATGGCGATTCGGTATTGATAACCGCCGATATTCTTATTCTTAACGAGTCCATTAATTTTACTCGAGACAACAATGAGCTGCAATCATCGGCATCTTCTTCTTCATCGATGGTATCTTCCTCTGTTGTCGCGGGCCCTGTGTCCGACGCGTTGAGTGGAAAATTCACTTGGAAAGTGCACAATTTCAGTTTATTTAAGGAGATGATAAAAACACAGAAAATAATGAGCCCCGTTTTTCCAGCTGGGGAGTGTAATTTGAGGATTAGTGTCTATCAGAGCTCGGTTAATGGAGTGGAATATCTGTCAATGTGCTTGGAAAGCAAGGATACGGACAAGACAGTGATGTTGTCCGATAAGAGTTGCTGGTGTTTATTTCGAATGTCAGTCTTAAACCAGAGGCCAGGTTCGAATCACATGCACAGGGATTCGTATGGGCGGTTTGCAGCTGATAATAAAAGCGGTGATAATACAAGCTTGGGATGGAATGATTATATGAAGATGTCAGATTTTATTGGGGCTGATTCAGGGTTTCTGGTGGATGACACTGCAGTTTTTAGTACGTCATTTCATGTGATTAAAGAGTTAAGTAGCTTCTCTAAGAATGGGGCTTTAATTGCAGGAAGAATTGGGAGTGGCGCAAGGAAATCAGATGGTCATATGGGTAAGTTTACTTGGAGGATTGAAAACTTCACAAGGGTAAAGGATTTATTGAAGAAGAGAAAAATAACGGGTCTTTGCATCAAGAGCCGGAGGTTTCAAATTGGTAACCGGGATTGTCGTCTCATTGTATATCCCCGAGGGCAGTCTCAGCCTCCTTGCCACCTTTCAGTGTTTCTTGAAGTTACAGACTCAAGAAATACTTCCAGTGATTGGAGTTGCTTTGTTAGCCATCGGTTGTCAGTTGTGAACCAGAAGATGGAGGAGAAGTCTGTTAGCAAGGAATCTCAGAACCGCTACTCCAAGGCTGCAAAAGATTGGGGCTGGCGTGAATTTGTGACCCTCACTAGCCTCTTTGATCAAGATTCGGGTTTTCTTGTCCAGGATACTGTTGTATTCTCAGCAGAAGTTCTTATATTGAAAGAGACATCTATAATGCAGGACTTGATTGATTACAATTCTGAGTTGAGTAGTAGTTCTTCCTTTACTGATAGTTATGTAAACAGAAGGACATTTACATGGAAAGTGGAGAATTTCCTGTCATTTAAGGAAATAATGGAGACTCGAAAGATCTTCAGTAAATTTTTTCAGGCTGGTGGATGTGAACTTCGGATTGGTGTGTATGAGTCCTTTGACACCATATGTATTTATCTAGAGAGCGATCAGGCTGTTGGTAGTGATCCGGATAAAAACTTTTGGGTTAAATACAGGATGGCTGTTGTGAATCAAAAGAATCCAGCCAAGACAGTGTGGAAGGAATCCTCTATTTGTACGAAGACATGGAATAATTCTGTTTTGCAATTCATGAAGGTGTCTGATATATTGGAAGCAGATGCAGGGTTTCTTGTCCGTGACACTGTTGTTTTTGTCTGTGAAATATTGGATTGCTGCCCTTGGTTTGATTTTTCAGACTTAGAGGTTTTGGCTTCAGATGATGATCAGGATGCTTTGACAACTGATCCTGATGAACTTGTTGACTCTGAAGACAGTGAAGGAATAAGTGGAGATGAAGAAGACATTTTTAGAAATCTTCTTTCTCGAGCTGGATTTCACCTAACATATGGAGATAATCCTTCACAGCCACAAGTTACGTTAAGAGAAAAGCTTTTAATGGATGCTGGGGCAATTGCTGGATTTCTGACTGGACTGCGGGTATATCTTGATGATCCTGTGAAAGTAAAGCGTCTGCTTCTTCCAACCAAGCTCTCCGGTAGTTGTGAAGGAAAGAAGGTTGCTAAGGCTGATGAATCTTCCCCCAGTTTGATGAATTTGCTGATGGGAGTTAAGGTCTTACAGCAGGCAATCATTGATTTACTTTTGGATATAATGGTGGAATGCTGCCAACCTTCTGAAGGGTATTGTGCTGCCGATTCTCCTGATACATGCTCGAAAACATCTCCTGATCGTAGTGGAGCTGCTAGTCCTGTTGAATGTGATAGAGAAAATGGGGCAGCAGAATCTGCTCAATTTCCTGTTGATGAGAGATTGGATTCTGCTGATGAAGAAAGTAGTGGTACATCTGCTGTACAAAGCTCTGATTCAAACGGCAGCATCATTCAGGAGAAAGCTCTTCCTGGACAACCTATTTTTCCACCAGAAACATCTGCTATTGTATCAGAAAATCCGTCCTTTCGATCAAAGACCAAGTGGCCAGAACAGTCGGAGGAGCTCTTAGGTTTAATTGTAAACTCACTAAGAACCCTTGATGGGGCTGTTCCTCAAGGCTACCCTGAGCCACGACGGCGTCCTCAGTCTGCACGCAAAATTTCTATTGTGTTGGACAAAGCTCCTAAGCATCTGCAAGCTGACCTTGTAGTGCTGGTTCCCAAATTGGTTGAGCCTTCAGAACATCCACTAGCTGCCTGTGCACTTCTTGAGCGACTCCAAAAGCCAGATGCAGAACCTGCCTTGCGAATGCCTGTTTTTGAGGCTCTTAGTCAACTGGATTGTTGTAATGAAGTGTGGGAACGTGTTCTATTCCAATCAATTGAGCTTTTGGCCGACTCAAACGGTGAACCCCTTTCTGCAACTATAGATTTTATATTCAAAGCAGCAGCTCAATGTCAACATCTTCCTGAAGCAGTTAGATCTGTTCGTGTCAGACTAAAAAATCTAGGTCTTCAGGTTTCACCCTGTGTCCTTGACTTTTTGAGTAAGACTATTAATAGTTGGGGGGATGTTGCTGAAACTATACTGAGGGACATTGATTGTGATGATGACTTGGGTGACAGTTGCTCAGCGCTGCCATGTGGACTTTTCCTATTTGGTGAACATGCTTCTCAAACCTTTGAGAGAGCTGTAGCTCGAGGTGCAATTGGTGCTCAGTCTGTAGCCTTGGTTTTGGAGAAGCGTGCCTCCCAAAGATTGACTAATAATTCCGTAAATGCAGCTGAAAGTTTTCCATCTTCAGATGTTGTTGCTGAGGGAAATGCCAATGAACCCTTTGGAGTTCAAAAAGATGATTTTACTTCAGTTCTTGACCTTGCTGAAACATTAGCACTGTCCAGGGACCCAAGTGTGAAAGAATTTGTGAAGTTGCTCTATTTGATATTGTTTAGATGGTATGCTGATGAATCTTATCGTGGGACAATGCTCGAGAGGCTTGTTGGCCGTGCCACCAGTTCTACCGATAATGGCCATGAAGTAGACTTGGATTTGGATATTTTAGTTACTTTGGCCTGTGAGGAGCAGGAAATTGCTAGACTTGTTTTGAGTATGATGCGGGAAGTTGCTGAAATTGCAAATGTTAATCGGTCTGCTCTATGGCACGAGTTATGTGCTAGCAAAGATGAAATTGTTCGTCTTCATGAAGAAAAGAAAGCTGAAATTTCCATTATGGCTAAGGAAAAAGCTATTTTTACACAAAAACTGAGTGAATCCGAGGCCACAAGTATTCGTCTCAAGTCTGAGATGAGGGCTGAGATGGATCGGTTGGCTCGGGAGAAGAGGGAGCTTGCTGAACGAGTACAAGAAGTTGAAAGTCAGCTTGAGTGGCTTCGTTCAGAGCGGGATGATGAAATAGCAAAGCTCTCCGGGGAGAAGAAAGCTCTTCAGGACCGTGTGCATGATGCAGAGGCACAACTCTCACTATTGAAGTCCCGGAAACGTGATGAATTGAAGAAAGTAGTCAAGGAAAAAAATGCTCTTGCCGAAAGATTGAAGAGCGCCGAAGCTGCACGGAAGAGATTTGATGAAGAACTGAAAAGATATGCAACAGAAAATATCACTCGTGAAGAAGTACGGAAATCGCTTGAGGACGAAGTCCGTAGATTGACGCAAACAGTTGGGCAAACTGAGGAAGAGAAGAGAGAGAAGGAAGAGCAGGTTGCTAGGTGTGAAGCATATATTGATGGCATGGAATCAAAATTGCAGGCCTGCCAGCAATATATTCACACACTGGAAGCTTCACTTCAGGAGGAAATGTCACGGCATGCTCCTCTATACGGTGCTGGTCTGGAGGCTCTTTCAATGAAAGAGTTGGAAACACTGGCACGCATCCATGAGGAAGGGCTAAGGCAGATCCATGGCCTTCAACAGCGCAAGAGCAGTCCAGCTGGCAGTCCTCTTGTGAGTCCACATGCCCTTCCTCCTCACATTCATGGATTATATCCCTCTGCCTCCCCTTCATTGCCTCTGGGACTCGCTCCATCACTCATTCCAAATGGGGTACACTGCAATGGCCAGGTCAATGGAGCTATTGGGCCCTGGTTTAAACACACTTGA 4956 0.4455 MKHTSPEAAPSLSSAPSSTTDQSHVATPSSSSASLDKPVLGSSAAAQEDLAIGSRDGGGAQQSVTIERRGDYSAVCRWTVYNFPRIKGRALWSKYFEVGGYDCRLLIYPKGDSQALPGYISIYLQIMDPGATSSSKWDCFASYRLAIVNVADDSKTIHRDSWHRFSSKKKSHGWCDFTPSTTVLDPKLGYLFNGDSVLITADILILNESINFTRDNNELQSSASSSSSMVSSSVVAGPVSDALSGKFTWKVHNFSLFKEMIKTQKIMSPVFPAGECNLRISVYQSSVNGVEYLSMCLESKDTDKTVMLSDKSCWCLFRMSVLNQRPGSNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFIGADSGFLVDDTAVFSTSFHVIKELSSFSKNGALIAGRIGSGARKSDGHMGKFTWRIENFTRVKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEEKSVSKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVVFSAEVLILKETSIMQDLIDYNSELSSSSSFTDSYVNRRTFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRIGVYESFDTICIYLESDQAVGSDPDKNFWVKYRMAVVNQKNPAKTVWKESSICTKTWNNSVLQFMKVSDILEADAGFLVRDTVVFVCEILDCCPWFDFSDLEVLASDDDQDALTTDPDELVDSEDSEGISGDEEDIFRNLLSRAGFHLTYGDNPSQPQVTLREKLLMDAGAIAGFLTGLRVYLDDPVKVKRLLLPTKLSGSCEGKKVAKADESSPSLMNLLMGVKVLQQAIIDLLLDIMVECCQPSEGYCAADSPDTCSKTSPDRSGAASPVECDRENGAAESAQFPVDERLDSADEESSGTSAVQSSDSNGSIIQEKALPGQPIFPPETSAIVSENPSFRSKTKWPEQSEELLGLIVNSLRTLDGAVPQGYPEPRRRPQSARKISIVLDKAPKHLQADLVVLVPKLVEPSEHPLAACALLERLQKPDAEPALRMPVFEALSQLDCCNEVWERVLFQSIELLADSNGEPLSATIDFIFKAAAQCQHLPEAVRSVRVRLKNLGLQVSPCVLDFLSKTINSWGDVAETILRDIDCDDDLGDSCSALPCGLFLFGEHASQTFERAVARGAIGAQSVALVLEKRASQRLTNNSVNAAESFPSSDVVAEGNANEPFGVQKDDFTSVLDLAETLALSRDPSVKEFVKLLYLILFRWYADESYRGTMLERLVGRATSSTDNGHEVDLDLDILVTLACEEQEIARLVLSMMREVAEIANVNRSALWHELCASKDEIVRLHEEKKAEISIMAKEKAIFTQKLSESEATSIRLKSEMRAEMDRLAREKRELAERVQEVESQLEWLRSERDDEIAKLSGEKKALQDRVHDAEAQLSLLKSRKRDELKKVVKEKNALAERLKSAEAARKRFDEELKRYATENITREEVRKSLEDEVRRLTQTVGQTEEEKREKEEQVARCEAYIDGMESKLQACQQYIHTLEASLQEEMSRHAPLYGAGLEALSMKELETLARIHEEGLRQIHGLQQRKSSPAGSPLVSPHALPPHIHGLYPSASPSLPLGLAPSLIPNGVHCNGQVNGAIGPWFKHT 1651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00805 1651 PANTHER TRAF-LIKE FAMILY PROTEIN 1170 1651 - -
Accr4g00805 1651 Coils Coil 1492 1526 - -
Accr4g00805 1651 CDD MATH 77 203 IPR002083 GO:0005515
Accr4g00805 1651 SMART math_3 249 362 IPR002083 GO:0005515
Accr4g00805 1651 SMART math_3 585 685 IPR002083 GO:0005515
Accr4g00805 1651 SMART math_3 417 529 IPR002083 GO:0005515
Accr4g00805 1651 SMART math_3 75 183 IPR002083 GO:0005515
Accr4g00805 1651 CDD MATH 582 704 IPR002083 GO:0005515
Accr4g00805 1651 MobiDBLite consensus disorder prediction 913 927 - -
Accr4g00805 1651 ProSiteProfiles MATH/TRAF domain profile. 580 704 IPR002083 GO:0005515
Accr4g00805 1651 Coils Coil 1379 1484 - -
Accr4g00805 1651 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 60 209 IPR008974 GO:0005515
Accr4g00805 1651 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 567 706 IPR008974 GO:0005515
Accr4g00805 1651 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 404 557 IPR008974 GO:0005515
Accr4g00805 1651 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 239 387 IPR008974 GO:0005515
Accr4g00805 1651 ProSiteProfiles MATH/TRAF domain profile. 73 203 IPR002083 GO:0005515
Accr4g00805 1651 SUPERFAMILY TRAF domain-like 581 705 - -
Accr4g00805 1651 ProSiteProfiles MATH/TRAF domain profile. 244 381 IPR002083 GO:0005515
Accr4g00805 1651 Pfam MATH domain 81 204 IPR002083 GO:0005515
Accr4g00805 1651 Pfam MATH domain 593 700 IPR002083 GO:0005515
Accr4g00805 1651 Pfam MATH domain 444 550 IPR002083 GO:0005515
Accr4g00805 1651 SUPERFAMILY TRAF domain-like 242 387 - -
Accr4g00805 1651 MobiDBLite consensus disorder prediction 1 38 - -
Accr4g00805 1651 ProSiteProfiles MATH/TRAF domain profile. 412 548 IPR002083 GO:0005515
Accr4g00805 1651 MobiDBLite consensus disorder prediction 7 38 - -
Accr4g00805 1651 SUPERFAMILY TRAF domain-like 413 554 - -
Accr4g00805 1651 CDD MATH 413 548 IPR002083 GO:0005515
Accr4g00805 1651 CDD MATH 245 377 IPR002083 GO:0005515
Accr4g00805 1651 MobiDBLite consensus disorder prediction 865 927 - -
Accr4g00805 1651 SUPERFAMILY TRAF domain-like 73 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00805 Accr-Chr4 7634607 7642572 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00805 - - ccaj:109798115 2705.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00805 4 7634607 7642572 Accr4g00805 4 7634607 7642572 ECH