Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00793 ATGATGGATTCAAGTAATCTTTCACCTGCTGCTGGACTTGAAGAAGTCCATCAAAATGGTGTTCATGAAGAACTTGCAGACTCTGTAAAGCATGGTGTTGTTTCAAACGAAGCTGGCCCCAATGCGGCTGAAATTAGAGGAACTGTCGCTCAAAATGGTAATTTAGGCAATGATGGTCTGTTGGATAACACTGCAACTGATATATCTGCGGCAGAAAGTAAAGAGGAATCTAATGACAGCACAGTCAGCAACAATGTGGCAATTACTAAGCAAGAGGAGGTGAAAAATACAGAGCAATTAAGAACATCAAAGGGTCCTGTCAAGACCAAGGCTGTGAAGCCGGCTAATCCCAAAGGTGTTCATACAAGTGGGGTGAAGAAAACTAAGGATAGAAAGGACGAAGAGGCTCAACCCTATGTGTTAAATGGCTCTCTGACTTTGACCTCTCGGCAGCCTGTTAAAAGCAAATCATCCAATGATCGCAAGACTCAAATTTCCAAGCACTCTAAGAAGTCTGATGCAGCATCCTCTGGTTCACCCATAGAGAATAAAAAACCAAAAGCATTGAAGAAAGGAACTCCTGATAAAGTTCAAGGAGAAGCACAATCTTCTTTAAATGTCACTGCAGAAGATGCTGAACCTCCCAAGGTGGGGGTGCTTCCAAATTATGGATTTAGTTTCAAATGTGATGAACGGGCTGAGAGAAGAAGAGAGTTCTACTCTAAGCTTGAGGAAAAGATCCATGCAAAGGAAGTGGAGAAGAGTAACTTGCAAGCAAAAACCAAGGAGACCCAGGAAGCTGAAATTAAGATGCTCAGGAAGAGTCTAGGATTTAAAGCGACGCCAATGCCCAGCTTTTACCAGGAGCCTCCTTCAAAGGTGGAGTTAAAGAAGATACCAACTACAAGAGCAAAATCTCCTAAGCTAGGACGAAGGAAGAATTCAACAGGCTCAGAGTTAGATGGAAGTCCTAGCAGCAGCGCTCCTCCATTGGGTCGTCTAAGTCTGGATGACAAAGTGTCTAAGAGTAACCCCATCAAGAAAACTACTCCTGCCCATCCAAAGAAGCCGCAACGGAAATCTCTTCCTTCAAAACTGCCTTCTGAAAAGACCAGTTCATCTAAGGCACCGAACAAGGAAAAGACCACATCATCAAGTAAAACAAATAAAGAGACCACCTTGTCCAACACAGGTGAGAAAGAGAAGTGTCAAATGGATGCAGCCAATGAAGAGAATGGTGCCTTGTCATGTAATACATGTGAAGCTCCTTCGCTGAATATAGATCAAAATGCGGATCTCTTAGACAAGTCAACTGAAACAGAGCCTCAAGTGAATGGTGACATTGTGGTTGAAGAGCAACCTCAGCTCACATTGGCGCAGAAACCAGTCGCGACAGAGCATTAA 1404 0.4352 MMDSSNLSPAAGLEEVHQNGVHEELADSVKHGVVSNEAGPNAAEIRGTVAQNGNLGNDGLLDNTATDISAAESKEESNDSTVSNNVAITKQEEVKNTEQLRTSKGPVKTKAVKPANPKGVHTSGVKKTKDRKDEEAQPYVLNGSLTLTSRQPVKSKSSNDRKTQISKHSKKSDAASSGSPIENKKPKALKKGTPDKVQGEAQSSLNVTAEDAEPPKVGVLPNYGFSFKCDERAERRREFYSKLEEKIHAKEVEKSNLQAKTKETQEAEIKMLRKSLGFKATPMPSFYQEPPSKVELKKIPTTRAKSPKLGRRKNSTGSELDGSPSSSAPPLGRLSLDDKVSKSNPIKKTTPAHPKKPQRKSLPSKLPSEKTSSSKAPNKEKTTSSSKTNKETTLSNTGEKEKCQMDAANEENGALSCNTCEAPSLNIDQNADLLDKSTETEPQVNGDIVVEEQPQLTLAQKPVATEH 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00793 467 MobiDBLite consensus disorder prediction 311 330 - -
Accr4g00793 467 MobiDBLite consensus disorder prediction 277 402 - -
Accr4g00793 467 Pfam Targeting protein for Xklp2 (TPX2) domain 225 294 IPR027329 -
Accr4g00793 467 MobiDBLite consensus disorder prediction 1 223 - -
Accr4g00793 467 MobiDBLite consensus disorder prediction 364 402 - -
Accr4g00793 467 MobiDBLite consensus disorder prediction 47 93 - -
Accr4g00793 467 Coils Coil 240 260 - -
Accr4g00793 467 MobiDBLite consensus disorder prediction 155 169 - -
Accr4g00793 467 MobiDBLite consensus disorder prediction 123 137 - -
Accr4g00793 467 PANTHER PROTEIN WVD2-LIKE 4 82 439 IPR044833 GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00793 Accr-Chr4 7532382 7535756 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00793 - - gmx:100804879 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00746 3 8327697 8331135 Accr4g00793 4 7532382 7535756 CCT
Accr4g00793 4 7532382 7535756 Accr4g00793 4 7532382 7535756 ECH