Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00778 ATGGGGAGGGGCGGAATTCCGTCAATTGATGACAGTAGAGGTAGGCTTTTCTCAATCTCTGATTTGGGGTCTCCATGGAGTATTCAAGAGGGCAATTATGCTCCTGGAGGCTTATTTGCCAGTGTGAATCAGACGGGAATGGGGTTTGGCGTTCAACCCAACACTCCTGATTCCCGCAACAATGGCCAGGAAAAACTTCCCTATTCTGAATTGTTCATGAAGTATGTGCAATCACTGGGCAAAGTTGAGAATGATGGAGTAAAGGAAGAGAAAGAGAATAAAGGCTGGAAGAAGTGTGGTCTTAAACTGAAAATTAAGATCAGAAATCCTTCGCTGAGGAGGTTAATTAGTGGTGCCATAGCCGGGGCGGTGTCCCGGACCGCAGTGGCACCTTTGGAGACTATAAGGACTCATTTAATGGTTGGAAGTAGTGGCCATTCTTCTACTGAGGTTTTCGGAAATATTATGAAGACTGATGGTTGGACTGGATTGTTTAGAGGTAATCTCGTTAATGTGATTCGGGTTGCACCTAGCAAGGCCATAGAGCTGTTTGTTTATGATACAGTCAACAAGAATCTATCCCCTGAGCCCGGGGAACAGCCAAAACTCCCTGTATCTCCATCATTGCTTGCTGGCGCCTGTGCAGGAGTTAGTTCTACTATATGCACATACCCACTCGAGTTAGTCAAGACTCGACTCACAATTCAGAGAGGTGTTTATGATGGTTTGCTTGATGCATTAGTAAAGATAATTCGTCATGAGGGCCCTGCAGAACTTTATCGAGGCCTTACTCCCAGCCTTATCGGAGTGATTCCATATGCAGCTACCAACTACTTTGCCTATGACACTCTGCGGAAAGCATACCGAAAAATATTTAAGCAAGAGAAGATTGGCAACATCGAAACCCTCTTGATCGGATCAGCAGCCGGTGCTATTTCAAGCACTGCTACTTACCCTCTCGAGGTGGCTCGCAAGCATATGCAAGTGGGAGCTCTGAGCGGAAGGCAGGTTTACAAAAATGTGATTCATGCTCTTGCAAGCATACTGGAGCAAGAAGGGATTCCGGGTTTATATAGAGGGTTGGGACCAAGCTGTACCAAGTTAGTACCAGCCGCTGGAATCTCTTTCATGTGCTATGAAGCGTGCAAGAGAATACTGGTTGAGATAGATGCTGAGGAATAG 1182 0.4602 MGRGGIPSIDDSRGRLFSISDLGSPWSIQEGNYAPGGLFASVNQTGMGFGVQPNTPDSRNNGQEKLPYSELFMKYVQSLGKVENDGVKEEKENKGWKKCGLKLKIKIRNPSLRRLISGAIAGAVSRTAVAPLETIRTHLMVGSSGHSSTEVFGNIMKTDGWTGLFRGNLVNVIRVAPSKAIELFVYDTVNKNLSPEPGEQPKLPVSPSLLAGACAGVSSTICTYPLELVKTRLTIQRGVYDGLLDALVKIIRHEGPAELYRGLTPSLIGVIPYAATNYFAYDTLRKAYRKIFKQEKIGNIETLLIGSAAGAISSTATYPLEVARKHMQVGALSGRQVYKNVIHALASILEQEGIPGLYRGLGPSCTKLVPAAGISFMCYEACKRILVEIDAEE 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00778 393 SUPERFAMILY Mitochondrial carrier 110 381 IPR023395 -
Accr4g00778 393 Gene3D Mitochondrial carrier domain 106 390 IPR023395 -
Accr4g00778 393 PANTHER SOLUTE CARRIER FAMILY 25 98 386 - -
Accr4g00778 393 FunFam Adenine nucleotide transporter BT1, chloroplastic/mitochondrial 107 390 - -
Accr4g00778 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 287 IPR018108 -
Accr4g00778 393 Pfam Mitochondrial carrier protein 111 193 IPR018108 -
Accr4g00778 393 Pfam Mitochondrial carrier protein 297 387 IPR018108 -
Accr4g00778 393 Pfam Mitochondrial carrier protein 203 290 IPR018108 -
Accr4g00778 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 192 IPR018108 -
Accr4g00778 393 PRINTS Mitochondrial carrier protein signature 306 328 IPR002067 GO:0055085
Accr4g00778 393 PRINTS Mitochondrial carrier protein signature 260 278 IPR002067 GO:0055085
Accr4g00778 393 PRINTS Mitochondrial carrier protein signature 167 187 IPR002067 GO:0055085
Accr4g00778 393 PRINTS Mitochondrial carrier protein signature 127 141 IPR002067 GO:0055085
Accr4g00778 393 PRINTS Mitochondrial carrier protein signature 114 127 IPR002067 GO:0055085
Accr4g00778 393 PRINTS Mitochondrial carrier protein signature 218 236 IPR002067 GO:0055085
Accr4g00778 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 297 385 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00778 Accr-Chr4 7442316 7444333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00778 209 393 Organic Solute Cotransporters AT4G32400 32.796 2.44e-22 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00778 K14684 - qsa:O6P43_019432 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00732 3 8192470 8195062 Accr4g00778 4 7442316 7444333 CCT
Accr4g00778 4 7442316 7444333 Accr4g00778 4 7442316 7444333 ECH