Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00713 ATGGAGTTTCCCACCTCCTCTGCTGTGATCGCTCAGCAAACCTGGGAGCTTGAGAACAACATCGTCCCCATGGACTCTCCGACTACCAGCGCCGACCAAGGCTCCGACGCCATCTTCTTCTACGACGAGGCCGCCCAGACCGAATTCCAGAGAAGCAAGCCTTGGGTTAACGACCCCCACTACTTCAAGCGCGTTAAGATCTCCGCCCTTGCCCTTCTCAAGATGGTTGTCCATGCTCGCTCGGGTGGCACTATCGAAGTCATGGGTCTCATGCAGGGCAAAACCGACGGCGATTCCATCATCGTCATGGACGCCTTCGCTTTGCCCGTTGAAGGCACCGAGACTCGTGTCAATGCCCAGGCCGATGCCTACGAATATATGGTTGATTATTCTCAGACTAACAAGCAGGCTGGCCGTCTGGAAAATGTTGTTGGATGGTACCATTCCCACCCTGGTTATGGATGTTGGCTTTCTGGCATTGACGTGTCTACGCAAATGCTAAATCAGCAATTTCAAGAGCCCTTTCTGGCTGTAGTTATTGATCCAACTAGGACGGTTTCTGCTGGAAAAGTTGATATTGGAGCTTTCAGGACATATCCAGACGGTTATAAGCCTCCAGATGATCCTGTCTCTGAGTATCAAACGATCCCGTTAAATAAGATTGAAGACTTTGGTGTTCACTGTAAACAGTACTATGCTTTGGATATCACTTACTTTAAGTCTTCTCTTGATTCACATCTCTTGGATCTCCTTTGGAACAAATATTGGGTGAATACTCTTTCATCTTCTCCATTATTGGGTAATGGAGACTATGTCGCTGGACAAATATCAGATCTAGCTGAAAAGCTAGAACAAGCAGAAAATCAGTTGGCACACCCACGCTTTGGGTCAATAATAGGTCCTCCTCAAAAAAAGAAAGGAGAGGAGTCTCCCCTTGCTAAGATCACTCGTGACAGTGCAAAAATTACTGTGGAGCAAGTACATGGTTTGATGTCGCAGGTCATCAAGGACACCCTCTTCAACTCTGTTCGTCAAGCAAACAATTCCGTTACTGAAGCATCTGACCCTGAACCAATGATTGAAAGCTGA 1089 0.4738 MEFPTSSAVIAQQTWELENNIVPMDSPTTSADQGSDAIFFYDEAAQTEFQRSKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDSIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVDIGAFRTYPDGYKPPDDPVSEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHPRFGSIIGPPQKKKGEESPLAKITRDSAKITVEQVHGLMSQVIKDTLFNSVRQANNSVTEASDPEPMIES 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00713 362 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 56 352 - -
Accr4g00713 362 SMART pad1_6 64 201 IPR000555 GO:0005515|GO:0008233|GO:0008237
Accr4g00713 362 SUPERFAMILY JAB1/MPN domain 64 202 - -
Accr4g00713 362 Gene3D Cytidine Deaminase, domain 2 4 267 - -
Accr4g00713 362 FunFam COP9 signalosome complex subunit 5 5 267 - -
Accr4g00713 362 Pfam Cop9 signalosome subunit 5 C-terminal domain 261 341 IPR040961 -
Accr4g00713 362 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 62 173 IPR000555 GO:0005515|GO:0008233|GO:0008237
Accr4g00713 362 ProSiteProfiles MPN domain profile. 65 202 IPR037518 -
Accr4g00713 362 CDD MPN_RPN11_CSN5 54 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00713 Accr-Chr4 6846667 6850634 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00713 K09613 - qsa:O6P43_015592 654.055