Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00650 ATGGCTTCCCACGAACAAGATGATGCGATTGCCGGATATGATGACCATCGACAGCCACCATCACAATCTCAAGACCTGGGATATGATCCTAATTTCGTACCCGATTCTGTAAAGTCATTTGTTGTCCACCTCTACCGCCACATCCGAGAGAAAAATGTGTACGAGATCCACCAGATGTACGAGACCTCTTTCCAAACCCTCTCGGAGCGTCTCTTCAAGGATACTCCGTGGCCTTCTGTGGACGCTGTCGCTAACTACGTTGACAATGATCATGTGTTTTGCCTCCTGTACCGCGAGATGTGGTACCGCCACCTCTATGCTAGGCTTACGCCAACGCTTAACCAGAGGATAGATTCCTGGGACAATTATTGTAGCCTCTTTCAGGTTGTGTTGCATGGAGTTGTCAATATGCAGCTACCCAATCAGTGGTTGTGGGATATGGTGGACGAGTTTGTTTACCAGTTTCAGAGCTTCTGTCAATATAGAGCCAAGATGAAGAACAAGACTGAGGCGGAAATTGCAATTTTGAGACAGTATGATCAGGCTTGGAACGTGTATGGTGTCCTCAACTTCTTGCAGGCTCTTGTTGAGAAGTCCATGATTATTCAGATTCTTGAGCGAGAGAAAGAAGGCCTGGAACGGTTTACTGATACTGATGGCTATGATTACAGCGGAGGGAGTAATGTCTTAAAGGTTTTGGGGTATTTCAGCATGGTAGGATTGCTGCGAGTACATTGTCTTTTAGGTGATTATCACACAGGTCTCAAGTGCTTGCTTCCTATTGATATTAGTCAACAAGGTGTTTACACCAGTGTTATTGGAAGCCACATTACCACCATATATCATTATGGTTTTGCCAATCTTATGTTGCGAAGGTATGTGGAAGCAATTCGTGAATTTAACAAAATTCTCTTATATATCTATAAGACAAAACAGTATCATCAGAAATCCACACAGTATGAACAGATACTGAAGAAGAATGAGCAAATGTATGCCTTGCTGGCTATTTGCCTGTCGCTCTGCCCCCAAAGCAGGCTTGTTGATGAAACTGTAAACTCTCAGTTGCGGGAGAAGTATGGTGAGAAGATGATTAGAATGCAAAGATATGACGATGAGGCTTTTGCTATGTATGATGAGCTCTTTTCCTATGCATGCCCCAAATTCATTACCCCATCAGCACCTAGTTTTGAGGAGCCTCTAATTAATTACAACCAGGATGCCTACAGACTTCAGTTGAAACTGTTCCTTTATGAAGTGAAGCAGCAACAATTGTTATCAGGCGTCCGGACCTTCTTGAAAGTTTATTCAACAATCTCTCTTGCGAAACTTGCTAGCTACATGGAAGTAGATGAAGCCAATTTAAGGACTATTTTGATGACATACAAGCATAAAACTCATGCCGTTGATAGTGATGGAAAAATTGTATCCAATGCTGATGTGAATTTCTACGTTGATGATGATATGATTCACGTTGTGGAGTCTAAGCCCCCCAAGCAATATGGGGATTACTTCTTGCGTCAGATTGTCAAGCTTGAAGGCGTTATCAATGAGATAGACGGTATAAAGCTGGAATAA 1575 0.4267 MASHEQDDAIAGYDDHRQPPSQSQDLGYDPNFVPDSVKSFVVHLYRHIREKNVYEIHQMYETSFQTLSERLFKDTPWPSVDAVANYVDNDHVFCLLYREMWYRHLYARLTPTLNQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEAEIAILRQYDQAWNVYGVLNFLQALVEKSMIIQILEREKEGLERFTDTDGYDYSGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLLPIDISQQGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFNKILLYIYKTKQYHQKSTQYEQILKKNEQMYALLAICLSLCPQSRLVDETVNSQLREKYGEKMIRMQRYDDEAFAMYDELFSYACPKFITPSAPSFEEPLINYNQDAYRLQLKLFLYEVKQQQLLSGVRTFLKVYSTISLAKLASYMEVDEANLRTILMTYKHKTHAVDSDGKIVSNADVNFYVDDDMIHVVESKPPKQYGDYFLRQIVKLEGVINEIDGIKLE 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00650 524 Pfam RNA polymerase I-associated factor PAF67 115 510 IPR019382 GO:0003743|GO:0005737|GO:0005852
Accr4g00650 524 ProSiteProfiles PCI domain profile. 299 498 IPR000717 -
Accr4g00650 524 MobiDBLite consensus disorder prediction 1 28 - -
Accr4g00650 524 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 29 521 IPR019382 GO:0003743|GO:0005737|GO:0005852
Accr4g00650 524 Hamap Eukaryotic translation initiation factor 3 subunit L [EIF3L]. 22 513 IPR019382 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00650 Accr-Chr4 6278496 6282556 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00650 K15029 - qsa:O6P43_015524 989.564
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00650 4 6278496 6282556 Accr4g00650 4 6278496 6282556 ECH