Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00645 ATGGTGAATTCTATGGTAGAACGAGCTACGAGCGACATGCTCATTGGTCCTGATTGGGCGATGAATATCGAGATCTGTGACATGCTGAATAGCGACCCCGGGCAAGCAAAGGACGTTGTTAAAGGTATAAAGAAGCGGATTGGAAGTAAGAATTCAAAAGTTCAACTTCTTGCACTAACTTTACTGGAGACAATCATAAAGAATTGTGGGGACATTGTTCATATGCACGTCGCTGAGAGAGATGTGCTTCATGAGATGGTAAAAATCATAAAGAAGAAGCCTGATTCTCATGTCAGAGAGAAGATTCTGATTCTTATAGATACTTGGCAAGAGGCTTTTGGAGGGCCAAGGGCTAGGTACCCGCAATATTATGCCGCATACCAGGAACTGCTGCGTGCTGGGGCAGTATTCCCTAGGAGGTCCGAACAATCTGCACCTGTATTCACACCGCCACAAACACAGCCATTGTCATCATATCCTCAAAATTTACGCAACTCTGAGGCTCATCAGGATGCAGCTGAGTCCTCTGCTGAGCCCGAGTTTCCAACTCTAACTTTGTCCGAAATTCAGAATGCTCGTGGTATTATGGATGTTCTTGCAGAAATGCTCAATGCAATAGAACCAAGTAACAAAGAAGGTCTCAGGCAGGAGGTTATTGTTGATTTGGTGGAGCAGTGTCGAACCTACAAGCAGAGAGTGGTGCACCTTGTTAATTCAACTTCGGATGAGTCACTGCTATGCCAAGGTCTTGCTCTCAATGATGATCTGCAGCGAGTACTCGCAAAGCATGAAGCCATTGCCTCAGGTGTTTCTATTGCAAATCATACAGAGAAAGTGAAGTCCGAGCCTGCTGGAGCACTTGTAGATGTTGGTCCTTTAATTGATAATGGAGATGCTAGCAAACAAACTGATGGGAGTGCTCAAGGTGCGTCCCAAACGTTGAACCAATTATTGCTTCCTGCTCCTCCCACTTCGAATGGTTCAGCTCCTCATGCCAAGGCTGATCCCAAAATGGACTTGCTCAGTGGTGATGATTATGCCTCACCTAAAGCAGAGACTTCACTTGCTCTTGTTTCTGTGGGAGAACAGCAACCAGCAAATCCTGTGTCTCAGCAGAATGCCCTTGTTCTTTTTGACATGTTTTCTAATGGAAACAGTGAACTGACTTCTGCACAGCCGACCCAGCCAACTAATGTTGGTGGACAAACCATTCCATTAGCCCCCCACAGTCAACAACAGCAGACGGGCATACCTACACAAGGGGCATTTTATGCCAATGGAAGCGTGCCTAATGTGGGGTCACCTCATTTTGAGCAACCACTTTACTCACAAGGCACAGGTCCTTCCTGGAATGGTCAGGTTGCCCAGCAGCAGCAACAGTCATCAGCTTCACCAGTTTATGGTGCACAAAGCAGTGAATCATTGCCACCACCCCCATGGGAAGCTCAACCAACAGATAATGGTAGTCCAGTAGCCGGCAGCAATTATGCCCCATCTATGCAAGTCTCTCAAGTGGTTATGACGCATGTTCAGGGTGGTGCACATACTCAGGGAATTCCAGCATTGGGGAATGACCAAGTTGTTTATATGCAGCCAAATGCACCAATGAATAACCATGTTGTTTACAGCAATCAGATGGGCTTGCACCCTCAGCATATTCAGGGTGGCGCAGGACCCTATATGGGTATGGTTTCTCCTCAATTTCAAGCTGCTCCTATGGCTTCTATGTATCCTCAACAGATGTATGGCAACCAATTCTCGGGATATGGCTACGGTCAGCAGCAGGGGGTCCCATACCTCGAGCAGCAAATGTATGGCCTATCTGTTAGAGATGATAATGGTTTGAGAAACCCCTACCAGGTTTCCTCATCATCATATATGCCACCTGGCAAACCTGCCAAACCAGAGGACAAGTTATTTGGGGACCTTGTTGACATGGCAAAAGTCAAATCAAAACCCACTCCAGGTCGAGCTGGTAGCATGTAA 1986 0.4673 MVNSMVERATSDMLIGPDWAMNIEICDMLNSDPGQAKDVVKGIKKRIGSKNSKVQLLALTLLETIIKNCGDIVHMHVAERDVLHEMVKIIKKKPDSHVREKILILIDTWQEAFGGPRARYPQYYAAYQELLRAGAVFPRRSEQSAPVFTPPQTQPLSSYPQNLRNSEAHQDAAESSAEPEFPTLTLSEIQNARGIMDVLAEMLNAIEPSNKEGLRQEVIVDLVEQCRTYKQRVVHLVNSTSDESLLCQGLALNDDLQRVLAKHEAIASGVSIANHTEKVKSEPAGALVDVGPLIDNGDASKQTDGSAQGASQTLNQLLLPAPPTSNGSAPHAKADPKMDLLSGDDYASPKAETSLALVSVGEQQPANPVSQQNALVLFDMFSNGNSELTSAQPTQPTNVGGQTIPLAPHSQQQQTGIPTQGAFYANGSVPNVGSPHFEQPLYSQGTGPSWNGQVAQQQQQSSASPVYGAQSSESLPPPPWEAQPTDNGSPVAGSNYAPSMQVSQVVMTHVQGGAHTQGIPALGNDQVVYMQPNAPMNNHVVYSNQMGLHPQHIQGGAGPYMGMVSPQFQAAPMASMYPQQMYGNQFSGYGYGQQQGVPYLEQQMYGLSVRDDNGLRNPYQVSSSSYMPPGKPAKPEDKLFGDLVDMAKVKSKPTPGRAGSM 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00645 661 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Accr4g00645 661 CDD GAT_GGA-like_plant 188 266 - -
Accr4g00645 661 MobiDBLite consensus disorder prediction 420 496 - -
Accr4g00645 661 MobiDBLite consensus disorder prediction 620 639 - -
Accr4g00645 661 MobiDBLite consensus disorder prediction 437 471 - -
Accr4g00645 661 Pfam VHS domain 3 129 IPR002014 GO:0035091|GO:0043130
Accr4g00645 661 PANTHER TOM1-LIKE PROTEIN 1 652 IPR044836 GO:0035091|GO:0043130|GO:0043328
Accr4g00645 661 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Accr4g00645 661 MobiDBLite consensus disorder prediction 145 172 - -
Accr4g00645 661 Gene3D - 183 273 IPR038425 -
Accr4g00645 661 CDD VHS 2 132 - -
Accr4g00645 661 Pfam GAT domain 194 268 IPR004152 GO:0035091|GO:0043130
Accr4g00645 661 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Accr4g00645 661 MobiDBLite consensus disorder prediction 142 180 - -
Accr4g00645 661 FunFam TOM1-like protein 2 182 272 - -
Accr4g00645 661 Gene3D - 1 135 IPR008942 -
Accr4g00645 661 SUPERFAMILY GAT-like domain 139 269 - -
Accr4g00645 661 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Accr4g00645 661 FunFam TOM1-like protein 2 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00645 Accr-Chr4 6248533 6254665 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00645 - - gmx:100809022 961.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00645 4 6248533 6254665 Accr4g00645 4 6248533 6254665 ECH