Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00631 ATGGAAGCTTCATATACGGCATTTACAGTGAAATGCTCTGTTCAGAAAAAATCCAGCTCTGTCTCCCGCAATTTTTACCACTTCAACATTCCACTCTCCTCTTCTTTCAAGCCGATTCTTGGATCTCTTCCTCAAATCCCTTTGCAAATTGATGTACCCAAAACCCTGACCAGCTTCACAGCTAAAATACTGGACGCTTTTGTGGATTCAGTCTTTGAGTTCATTGACCATCCATTGCTTCCATCTCAGAGTAACTTTGCTCCTGTGGAGCAGTTGGAGGAAGCCATGCTTATGACAGACATAGAAGGAGATGTCCCACATGATTTTCCAGAGGGTGTCTATGTTAGAAATGGTCCAAATCCACTATTTGGAGGATTGAAAACAGCCAAATCTATCTTTGGGAGGTCAAGTCACGTTTGGGTTGAAGGAGAAGGAATGCTTCATGCTTTGTATTTTAAGAAAGCAAGCGATGGCAACTGGACGGTCATCTACAAAAACAGATACGTAGAAACTGAAACTTACAAGCTAGAGAAACAAAGAAACAAGCCTTCCTTTCTGCCAGCCATAGGAGGCGATTCACTTGCCATTTTGTCTGCTTATCTCCTAAACTGGTTGAGATTTGGAAAAGTGAATAAATACATTAGCAACACCAACGTGTTTGAGCATTCTGGGAAGTTTTACTCCATTGCTGAAAATCACATCCCACAAGAGATTGACATCATCACCCTCAAAACCTTGAGAAATTGGGATATCAATGGAGCAGGGGATCGACCTTTTATAAGCCATCCGAAGAAAGCACCAGGTACAGGAGAGTTAATTATAATGGGGGTGTCTCCAACTAAGCCTTTTGCTACACTTGGAATCATTTCTGACGATGGAAAGAAATTGATTCATAAAGTGGATATCAAATTGAATAGGTGCAGTCTTTGTCATGAAATAGGCATTACACAACGGTTCAATGTTATCATGGATTTTCCGCTAACCTTGGATCTAAACAGACTTATGAGAGGAGGCCCATTAATAGAATATAATAAGAAGGGGTACGCAAGAATAGGGGTAATGCCTCGCTATGGTGATGCCAACTCAATCCAATGGTTTGAAGTGAAACCTAATTGCACATTTCACATCATCAATTCCTTTGAGGACGCCCATGAGGTTGTAGTATGGGGATGCAGAGCTCTTGGTTCGGTAGTTCCTCGGGTTGACCCTAGTTTGAATCCATTTGAGGCTTTCTCTCGTTGTTATGAGTGGAGATTGAATCTGCAAAGTGGGGAAGTTAACGAGAGGGATCTCGGTGGAACTAAAGTATTGAATATGGATTTTCCTACGATTAATGCAAATTTTATAGGTATTAAGAATAGATATGGATACACTCAAGTGGTTGATCCAGAAGCTACCTACAGTGCAGGAGTGCCTAAATATGGAGGCCTAGCCAAGCTCTACTTTGAAAAAGCATGCATGGATTTATCAACGAATAACAAACAGCATGAAGAACCTATAAAGGTGGAATACCACATGTTTGAGAAGAATGTATTTTGCACAGGAGCATCCTTTGTCCTTAAAAGTGATGGAGTTGAAGAAGACGATGGTTGGATCATCACTTTTATTCACAACGAAGACACTGACATATCTCAAGCTCATATAATTGACACAAGAAAGTTCTCAGGAGACGCAGTTGCCAAAATTACAATTCCTCTACGAGTTCCTTATGGTTTTCATGGAGCTTTCATGCCAGTGTCATTGGAAGCTTAA 1752 0.4087 MEASYTAFTVKCSVQKKSSSVSRNFYHFNIPLSSSFKPILGSLPQIPLQIDVPKTLTSFTAKILDAFVDSVFEFIDHPLLPSQSNFAPVEQLEEAMLMTDIEGDVPHDFPEGVYVRNGPNPLFGGLKTAKSIFGRSSHVWVEGEGMLHALYFKKASDGNWTVIYKNRYVETETYKLEKQRNKPSFLPAIGGDSLAILSAYLLNWLRFGKVNKYISNTNVFEHSGKFYSIAENHIPQEIDIITLKTLRNWDINGAGDRPFISHPKKAPGTGELIIMGVSPTKPFATLGIISDDGKKLIHKVDIKLNRCSLCHEIGITQRFNVIMDFPLTLDLNRLMRGGPLIEYNKKGYARIGVMPRYGDANSIQWFEVKPNCTFHIINSFEDAHEVVVWGCRALGSVVPRVDPSLNPFEAFSRCYEWRLNLQSGEVNERDLGGTKVLNMDFPTINANFIGIKNRYGYTQVVDPEATYSAGVPKYGGLAKLYFEKACMDLSTNNKQHEEPIKVEYHMFEKNVFCTGASFVLKSDGVEEDDGWIITFIHNEDTDISQAHIIDTRKFSGDAVAKITIPLRVPYGFHGAFMPVSLEA 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00631 583 Pfam Retinal pigment epithelial membrane protein 86 578 IPR004294 GO:0016702
Accr4g00631 583 PANTHER BETA-CAROTENE DIOXYGENASE 93 577 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00631 Accr-Chr4 6155950 6159180 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00631 - - gmx:100817738 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00631 4 6155950 6159180 Accr4g00631 4 6155950 6159180 ECH