Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00624 ATGGCTTTCTGTACTCCCATCAGAAACTCCCTTTCATCACGGCCAACAATGGCGCTTTCTGATCACACCAATAAAAAGTCTGCCCTCCCATCATTTCTCACTAAAAACGGCCTCTTCAGAACCCAACGCCCTTTTCATCATCCTTACTTGTCTGTCACTAATGTTGCCAGTCCCTCCCCTCCGATTGCTCCGCCGCCACTAACACCGCCTAAGAGATCGGACACCACCGGTGGCCCCCACCATCCTGCATGGACTAGCATCCCCCAAGAGAGATGGGAAGGAGAACTCCATGTTCAAGGACAAATACCCTTATGGCTGAAAGGAACGTACCTGAGGAATGGTCCAGGGCTGTGGCACATAGGGGACTACAACTTCAGGCACCTTTTTGACGGCTACGCCACTCTGGTCAAGCTTCACTTTGAGAACGGCCGATTGATCGCCGGCCACCGCCAACTGGAATCTCAGGCCTATCAAGCCTCCAAAAAGAACCAAAAGCTCTGTTACCGTGAATTCTCCGAAGTCCCCAAGCATGACAATTTCTTAGCCTACGTTGGTGAGCTCGCTAATCTGTTCTCAGGCGCTTCTCTCACCGATAACGCAAACACCGGCGTCACGAAACTCGGCGACGGACGTGTGGTTTGCCTGACGGAGACCCAGAAAGGTTCTTACGTTATAGACCCAAACACATTGGAAACACTGGGGAGATTTGAGTACGGTGACACGTTAGGTGGTTTGATTCACTCAGCACATCCTATTGTGACCGATGAAGAATTCTTGACGTTGTTACCGGATCTGATAAAGCCTGGGTATTTAGTGGTGAGGATGGAAGCCGGGTCGAATGAACGGAAGGTGATAGGTCGGGTTGATTGTCGGGGCGGGCCGGCACCGGGTTGGGTCCATTCTTTCCCTGTGACGGAGCACTATATTGTTGTGCCTGAAATGCCCCTGAGATACTGTGCCCAGAATTTGCTGAGAGCTGAACCCACGCCTTTGTACAAGTTTGAATGGCACCCTGAATCCAAAGCTTTTATGCATGTTATGTGCAGGAGTAGCGGAAATATAGTGGCAAGCGTGGAAGTGCCATTGTTCGTGACATTCCATTACATAAATGCATATGAAGAAGAAGATGAAGATGGGAGAGTGACGGCCATTATTGCGGACTGTTGTGAGCATAGCGCTGACACCACCATTCTTGATAAGCTGAGGCTAAACAACCTCCGATCCTTCAACGGCCAGGATGTACTGCCGGATGCCAGGGTAGGGAGGTTCAGAATACCGATGAATGGGAGTGAATATGGGATATTAGAGGCAGCATTGGAGCCAAATGAACATGGGAGAGGCATGGATATGTGCAGCATCAACCCTAATTATTTGGGAAAGAAATACAGATATGCTTATGCATGTGGAGCCCAGCGCCCTTGTAACTTCCCCAACACCCTCACCAAGGTTGATTTAGAGGAGAAGAAGGCCAAGAATTGGTACGAGGAAGGCGCTGTTCCCTCAGAACCCTTCTTCGTGGCTAGACCTGGAGCTACAGAAGAAGACGATGGCGTGGTTATATCGATGGTAAGCGAGGGAAATGGAGAAGCATTTGCGCTGTTGTTGGATGGTTCCTCCTTTGAAGAGATTGCAAGAGCCAAGTTCCCTTATGGAATGCCCTACGGATTGCATGGATGCTGGGTTCCTAAACACTGA 1695 0.4997 MAFCTPIRNSLSSRPTMALSDHTNKKSALPSFLTKNGLFRTQRPFHHPYLSVTNVASPSPPIAPPPLTPPKRSDTTGGPHHPAWTSIPQERWEGELHVQGQIPLWLKGTYLRNGPGLWHIGDYNFRHLFDGYATLVKLHFENGRLIAGHRQLESQAYQASKKNQKLCYREFSEVPKHDNFLAYVGELANLFSGASLTDNANTGVTKLGDGRVVCLTETQKGSYVIDPNTLETLGRFEYGDTLGGLIHSAHPIVTDEEFLTLLPDLIKPGYLVVRMEAGSNERKVIGRVDCRGGPAPGWVHSFPVTEHYIVVPEMPLRYCAQNLLRAEPTPLYKFEWHPESKAFMHVMCRSSGNIVASVEVPLFVTFHYINAYEEEDEDGRVTAIIADCCEHSADTTILDKLRLNNLRSFNGQDVLPDARVGRFRIPMNGSEYGILEAALEPNEHGRGMDMCSINPNYLGKKYRYAYACGAQRPCNFPNTLTKVDLEEKKAKNWYEEGAVPSEPFFVARPGATEEDDGVVISMVSEGNGEAFALLLDGSSFEEIARAKFPYGMPYGLHGCWVPKH 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00624 564 PANTHER BETA-CAROTENE DIOXYGENASE 90 562 IPR004294 GO:0016702
Accr4g00624 564 MobiDBLite consensus disorder prediction 58 72 - -
Accr4g00624 564 MobiDBLite consensus disorder prediction 1 25 - -
Accr4g00624 564 MobiDBLite consensus disorder prediction 56 86 - -
Accr4g00624 564 Pfam Retinal pigment epithelial membrane protein 89 562 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00624 Accr-Chr4 6087361 6090297 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00624 K17913 - gmx:100814148 931.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00624 4 6087361 6090297 Accr4g00624 4 6087361 6090297 ECH