Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00571 ATGGCGTCGTTCCGACGGACTTTGTCGCCAGCGCACCCCGATCGGCAGTACCAAAATGGTGTTGGCTCGTTTTCAGTTTCCTCTTCTCATCACAAGTTTGCTTATACTGCCAAGTATGCTTCTACATTTCCAGTGTTGTTTGGGTATGTAGCCGGATTGCGGAGGTTTATTGCCGGGTTTGTTATGCGGCGGCATGCTCGGAAAGGGCAATGGAGAAGAGCATTGTTTAGCTGTTTAATCTTTTTCTTCTTAGGTTTCTTGTGGGGTATGTTTCCTATCGGTCACGTTGTCGACGACATTCGCCGTCGGGATGTCTCATTTGAGATCAAGCCGCCTCCTGCAAATGCAGAATCAGTCCCTGAGGATCGTGCCTTGAAGCGTGATGAGGCTTTGGTGGTTAATCCTTTGAGTTTGAGTGTCGATAAGCATAGTGCTGCCGATGATACGCTCGATTTTTTGCCGAGGAAGCAATTGATTGTGGTGACCCCCACATATAATCGGGCGCTTCAGGCCTATTTTTTAAACAGGCTGGGTCAAGTGCTCAGGCTCGTACCTCCGCCAGTTCTGTGGATTGTAGTGGAAATGAATTCAGCTTCAATGGAAACTGCTGAACTACTGAGGAAAACCGCTGTGATGTATAGGCATTTGGTCTGCACTGAGAACTCCACAAATGTGAAGGACAGAGGAGTTCATCAAAGGAATACGGCGTTGGAGCACATTGAGCGCCATAGACTAGATGGGATTGTCTACTTCGCAGATGACGATAATATATATTCTCTCGAGCTGTTTGAGACCTTAAGAGACATAAGACGCTTCGGTACTTGGCCTGTTGCCATGCTTGCACAAAGCAAAAACAAGGCCATCTTGGAGGGTCCAGTATGCAATGCAAGTCAAGTGATTGGTTGGCATACAAATGAGAAAAGCAAAAGAGTTCGCAGATTTCATGTTGATATGTCAGGTTTTGCTTTTAACAGCACAATCTTGTGGGATTCTAAAAGGTGGAAGCGTCCTACGTCAAATCCTATTCGCCAGCTAGACACAGTGAAGGAGGGTTTTCAAGAGACCACCTTTATAGAACAATTGGTGGAAGATGAGAGTCAAATGGAAGGTTCACTAACTGGTTGTTCCAAAATAATGAATTGGCATCTCCATTTGGATGCCCGCAATACATATTATCCCAAGGGTTGGCTGCTACAGAAAAACCTAGATGCTGTCATCCCTGTCAAGTAA 1230 0.4585 MASFRRTLSPAHPDRQYQNGVGSFSVSSSHHKFAYTAKYASTFPVLFGYVAGLRRFIAGFVMRRHARKGQWRRALFSCLIFFFLGFLWGMFPIGHVVDDIRRRDVSFEIKPPPANAESVPEDRALKRDEALVVNPLSLSVDKHSAADDTLDFLPRKQLIVVTPTYNRALQAYFLNRLGQVLRLVPPPVLWIVVEMNSASMETAELLRKTAVMYRHLVCTENSTNVKDRGVHQRNTALEHIERHRLDGIVYFADDDNIYSLELFETLRDIRRFGTWPVAMLAQSKNKAILEGPVCNASQVIGWHTNEKSKRVRRFHVDMSGFAFNSTILWDSKRWKRPTSNPIRQLDTVKEGFQETTFIEQLVEDESQMEGSLTGCSKIMNWHLHLDARNTYYPKGWLLQKNLDAVIPVK 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00571 409 Pfam Glycosyltransferase family 43 177 385 IPR005027 GO:0015018|GO:0016020
Accr4g00571 409 CDD GlcAT-I 158 387 IPR005027 GO:0015018|GO:0016020
Accr4g00571 409 FunFam Glycosyltransferases 157 399 - -
Accr4g00571 409 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 70 403 IPR005027 GO:0015018|GO:0016020
Accr4g00571 409 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 156 401 IPR029044 -
Accr4g00571 409 SUPERFAMILY Nucleotide-diphospho-sugar transferases 157 402 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00571 Accr-Chr4 5642053 5644318 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00571 1 409 Glycosyltransferase AT1G27600 61.650 7.40e-177 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00571 K20869 - qsa:O6P43_015413 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00571 4 5642053 5644318 Accr4g00571 4 5642053 5644318 ECH