Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00570 ATGGCCGCATTTCCCAGAGACCGAGCACTCTCTCTTTTAGCCGCTGCCAACAATCATGGCGACTTAGCTGTCAAGATTTCGTCTTTGAAACAGGCCAAGGATATTCTTCTGTCAATGGAGCCGTCTCTAGCCGCCGACCTTTTCTCCTACTTGGTTGAGCTTCAGTCCTCCCCCGAAGCCCTCGTTCGAAAGCTATTGATCGAGGTAATTGAAGAGATAGGTTTAAGAGCAGCAGAGCATTCTCCAACACTAATAGCTGTATTATTAGCATTTTTACGAGATAGTGACACAAATGTTGTAAAGCAATCTATTGTCAGTGGCACATATATCTTCTGCAATGTTTTGGCTGAGATGACGGTGCAGTATCAACAATATGGTAAAGTAGAGAGGTGGCTAGAAGAGATTTGGATGTGGATGCTCAAGTTTAAAGATGCTGTATTTGGGATTGCTCTGGAGCCTGGTTCAGTTGGAACGAAGTTGTTAGCGCTGAAATTCTTGGAAACTCTAGTCTTACTTTTTTCATCTGACATCAGTTATCCTGAGAAGTCACTTTTAGAAGGAGGCAGAAAAGTATTTAATATCTCATGGTTGGAGGTTAGTCACCCTGTTCTTGATCCGGTGATGCTCACGTCAGAAGCAAGTAGGACTGTTGGCATTCTATTAAACTTATTGCAATCGGCGGGTAGTGTGCCTGGCTGCTTGACAATTACTGTTGTCAATTGTCTTGCAGCCATAGCAAGGAAAAGGCCACAGCACTGCAATACTATTCTTCCAGCATTGCTTGATTTTGATCCAAATTTTCAAACAGTGAAAGGATGTCATGCTGCCAGTATTCAGTACTCCATAAGAACAGCATTTTTGGGGTTTCTAAGATGCACTCACTTACCAATATTAGAGTCAAGAGAAAGATTGGTAAAGAGCCTGCGAGCTATGAATGCAGGGGATGCTGCTGAGCAAGTCATTCGGCAAGTTGACAAATTGATTAGAAATGGTGATCGCTCTATTCGTGATGTTCGAGCTAGCAAGGATGATTACCTATCAACTCAGACACCAGTTTCTGGGGAATTATCTAGAAAAAGACCAATGCCTGTAGATAAAGAACAACTGACCAATGGTCACGAAGTCATCTCTAAGCGAATTAATTCTGGCCCTGGTCTACACGCTCCTTTATCTGTTCAAATAATTGATTCTGAGCAGGATGTTAACCCTGCAAGTGAACAATCCTCTAATGTTCCTGCGCTGGATAGTGACCTAGCTGCGGTGGAGCAAATGATTGCTATGATTGGTGCTTTGCTTGCTGAAGGAGAAAGAGGTGCTGAATCTCTTGAAATCCTAATTTCAAAGATCCATCCTGATTTGTTAGCTGATATTGTAATTACTAATATGAGGCACTTGCCTAAGACTCTGCCATCAATAACAAGGCTTGGGGATCTACCAGTAACACAAGCTGATACCCAACGCAGTCAATTGCGAGCTGCAGCATCTGCGCCCATAAATTCTGTTCAATCTTCTGCTATTACAGCTCAAGCTCCATTCCCTTCAGCTACAGCCGCTGCCACATCACTATCTGACGCCTCTAATGTCAATAATCTGCCCATTGATTCCAAACGGGATCCACGCAGGGATCCTCGTCGCCTGGATCCTAGGCGTGGAGCAGTAAATGCTGCAGGGACAGCCGTATCTATTATGGAAGATACTGGTTCTGTGAAAGTTGAGTTTGACGAATCTTTATCTTTGAGTAAGCCTGTTTCACACTCTGTTGCGACCACTATTGACAATGCTCCAGCACCTCTAACAGCCAATATCAAAAGTGAAGATATAATCTCTGAAGGCCCATCAGTTTCAGCTCCTGAAAAACCAATTACCACGATGGAGATTCAAGAGAAGCCCAGTGATATTGACCGGAGTCCAGAGGAAAATGCTTTTACAGATCCCTCACTTTCTGTTGCTGATGGTGTAGATGAGGATCTGAGTGCAGTGAAGCTATTAGATAACGAGACAAAAGGGACCAATTCAGTTATACTGGAATATGATCAGTTTTCTCCAGATGCTACATCTGTGTCTATATCAGAAGATTCCTGTCGGGAATTACCACAGCTTCCACCATATGTTGAACTGTCCAAAGATTGTGAAAGTAACATTAAACATATGGCGGTTAAGCATCTTATTGAGTCATACAAGCATTTGCATGGGACAGACTGTCAGCAGTTTTGCATGCTATTACTCGCCCGAATGGTAGCTCATATTGACGATGATAAAGAGTTTATCTTGATGCTGCAAAATCATGTCCTGGATGACCAGTGGCGGAAGGGCCATGAACTTGTATTGCATGTTTTGTACCATCTGCACTGCTGTACTATGCTGGATACAATTCCAAACTCTTCATCTGCTGTTCTGTATGAAAATTTTCTCTTGGGCGTGGCTAAATCCCTGTTGGAGTTTTTTCCTTCTTCAGACAAGTCTTTTAGCCGACTTCTAGGTGAAGTCCCTCTTTTGCCTGAATCCGCGATGAAAGTTTTGGATGATCTCTGCTATTCTAGTGTAGTTGATCATCATGGTAAAGTCATCCGTGACATTGAGCGCGTAACTCAGGGCCTTGGTGCGATATGGAGTTTGATATTGGGGCGTCCGCCATATCGACAGGCATGCTTGGATATAGCATTAAAGTGTGCAGTTCACCCCCAGGATGAGATTCGAGCAAAAGCTATTCGGCTGGTGGCAAACAAGCTCTATCAGTTGAGCTATGTATCAGAAGATGTTGAACAGTTCGCCAAACAGATGTTTCTGTCTGCTGTAGACCAAAAAGTCCTTGATATAGGTCTTTCTGAATCTGGACCTGTTGAGCAAGGAGCTGAAGCAGAGATTGGAATTCAGGAAACACCAGGCCCATTGCAAGTTTCAGTATCCGCCACATGTGAAAATGACCCCTCTAAAATTGCTCTACCAGTGGTTCAAAATGTCGCGTCTGTGTCTTTCACTGAAGCTCAACGTCTCATATCGTTGTTTTTTGCTTTATGCACAAAGAAACCCAGTCTTCTTCAGACTATCTTTGATGCCTATGGTCGAGCCCCAAAAACTGTAAAGCAGGCCATTCATCGTCACATTCCTATTCTTTTGAGGGCCTTAGGACAATCATATTCTAAAATTCTCCATATTATATCCGATCCGCCACAAGGAAGTGAAAGTCTTCTAACAATGGTGTTGCAAATATTGACTCAAGAAACGACACCATCGGCTGATCTGATAGCTACAGTTAAGCATTTATATGAAACTAAATTAAGGGATGTTTCGATTCTTGTTCCCTTTCTTCCATCATTATCCAAAAATGAGGTTTTACCAATATTCCCTCGGCTTGTTGATCTTCCATTGGAAAAGTTCCAAATGGCTCTTGCTCATGTACTACAGGGTTCTGCTCATACGGGCCCAGCATTGACACCTGTAGAAGTGTTGGTTGCGATCCATGGAATTGTTCCTGAGAAAGATGGCATTGCACTTAAGAAGATAACTGATGCTTGCACAGCTTGTTTTGAGCAACGTACTGTGTTCACACAACAGGTTCTGGGAAAAGCATTAAACCAGATGGTTGATCAAACTCCATTGCCTCTACTTTTCATGAGAACAGTTATTCAGGCGGTTGATGCTTTCCCAGTACTGGTTGATTTTGTTATGGAGATATTATCAAAACTTGTTAGTAAACAGGTTTGGCGGATGCCAAAACTTTGGGTTGGTTTCTTAAAATGTGTATATCAGACTCAGCCACGTTCTTTTCATGTACTGTTGCAGTTGCCGCCTCCACAATTGGAAAGTGCTCTCAACAAACATGCAAATCTCAGAGGTCCTCTTGCTTCTTACGCTAGTCAACCCACTGTAAAATCTTCACTACCAAGGTCAACATTAGTTGTGCTTGGTCTTGCAAATGAAACACAAACGCAACAGCATCCGTCGACCTCGTTGCACCCTTCCGACACAAGTTCTGTTCACGGAGCAACTCTGACATGA 3999 0.4304 MAAFPRDRALSLLAAANNHGDLAVKISSLKQAKDILLSMEPSLAADLFSYLVELQSSPEALVRKLLIEVIEEIGLRAAEHSPTLIAVLLAFLRDSDTNVVKQSIVSGTYIFCNVLAEMTVQYQQYGKVERWLEEIWMWMLKFKDAVFGIALEPGSVGTKLLALKFLETLVLLFSSDISYPEKSLLEGGRKVFNISWLEVSHPVLDPVMLTSEASRTVGILLNLLQSAGSVPGCLTITVVNCLAAIARKRPQHCNTILPALLDFDPNFQTVKGCHAASIQYSIRTAFLGFLRCTHLPILESRERLVKSLRAMNAGDAAEQVIRQVDKLIRNGDRSIRDVRASKDDYLSTQTPVSGELSRKRPMPVDKEQLTNGHEVISKRINSGPGLHAPLSVQIIDSEQDVNPASEQSSNVPALDSDLAAVEQMIAMIGALLAEGERGAESLEILISKIHPDLLADIVITNMRHLPKTLPSITRLGDLPVTQADTQRSQLRAAASAPINSVQSSAITAQAPFPSATAAATSLSDASNVNNLPIDSKRDPRRDPRRLDPRRGAVNAAGTAVSIMEDTGSVKVEFDESLSLSKPVSHSVATTIDNAPAPLTANIKSEDIISEGPSVSAPEKPITTMEIQEKPSDIDRSPEENAFTDPSLSVADGVDEDLSAVKLLDNETKGTNSVILEYDQFSPDATSVSISEDSCRELPQLPPYVELSKDCESNIKHMAVKHLIESYKHLHGTDCQQFCMLLLARMVAHIDDDKEFILMLQNHVLDDQWRKGHELVLHVLYHLHCCTMLDTIPNSSSAVLYENFLLGVAKSLLEFFPSSDKSFSRLLGEVPLLPESAMKVLDDLCYSSVVDHHGKVIRDIERVTQGLGAIWSLILGRPPYRQACLDIALKCAVHPQDEIRAKAIRLVANKLYQLSYVSEDVEQFAKQMFLSAVDQKVLDIGLSESGPVEQGAEAEIGIQETPGPLQVSVSATCENDPSKIALPVVQNVASVSFTEAQRLISLFFALCTKKPSLLQTIFDAYGRAPKTVKQAIHRHIPILLRALGQSYSKILHIISDPPQGSESLLTMVLQILTQETTPSADLIATVKHLYETKLRDVSILVPFLPSLSKNEVLPIFPRLVDLPLEKFQMALAHVLQGSAHTGPALTPVEVLVAIHGIVPEKDGIALKKITDACTACFEQRTVFTQQVLGKALNQMVDQTPLPLLFMRTVIQAVDAFPVLVDFVMEILSKLVSKQVWRMPKLWVGFLKCVYQTQPRSFHVLLQLPPPQLESALNKHANLRGPLASYASQPTVKSSLPRSTLVVLGLANETQTQQHPSTSLHPSDTSSVHGATLT 1332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00570 1332 Pfam Symplekin tight junction protein C terminal 1095 1273 IPR022075 -
Accr4g00570 1332 SUPERFAMILY ARM repeat 12 913 IPR016024 -
Accr4g00570 1332 MobiDBLite consensus disorder prediction 519 553 - -
Accr4g00570 1332 MobiDBLite consensus disorder prediction 534 549 - -
Accr4g00570 1332 Pfam Symplekin/PTA1 N-terminal 96 318 IPR032460 -
Accr4g00570 1332 MobiDBLite consensus disorder prediction 519 533 - -
Accr4g00570 1332 Gene3D - 2 339 IPR011989 -
Accr4g00570 1332 MobiDBLite consensus disorder prediction 1310 1332 - -
Accr4g00570 1332 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1330 - -
Accr4g00570 1332 MobiDBLite consensus disorder prediction 629 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00570 Accr-Chr4 5620317 5639883 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00570 K06100 - gmx:100789876 1840.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00570 4 5620317 5639883 Accr4g00570 4 5620317 5639883 ECH