Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00560 ATGGGCTCCATCAAGGTAGACCCCACGGCCGTCAAAGAGGACAACGACGAATCACCGATCGAGGAGGTCAGGGTGACGGTACCCACCGACGATGACCCGACCCTACCGGTTTGGACATTCCGGATGTGGTTTCTGGGTCTCATCTCAGTGGCGCTCCTCTCCTTCATCAACACGTTCTTCCAGTACAGGGCTGAACCTATGGTCGTCACCATGATCTCCGTTCAGATTGCTACGCTTCCGATCGGCAAGTTCATGGCAAAGATGCTGCCCACAACCAAGTATCGGGTCCTCGGGTCGGAGTTCTCACTCAACCCGGGTCCGTTTAACGTGAAGGAGCACGTGCTCATCTCCATCTTCGCCAACGTTGCCGGTAATACTGCCTACGCCGTGGGTATTGTCGATATTATAAAGGCTTTTTACGCAAGAAAGATCAGTTTCCTTGCCGGTTGGATCCTCGTCATCACAACGCAGGTTTTGGGGTATGGATGGGCTGGAATACTGAAGAAGTATGTCATAGAACCTGCTCACATGTGGTGGCCTTCTACTCTCGTTCAAGTCTCTTTGTTCAGGGCTTTACATGAAAAAGATCATAGGAGGATGTCGCGCGGGAAATTCTTCCTGATCGCATTTGTGTGCAGCTTGGCATGGTACGTTGTGCCGGGCTATCTTTTTCCGACGTTATCTTCTATTTCATGGGTATGTTGGGTATTTCCGAAATCAGTTACAGCCCAGCAAATAGGATCAGGCATGCAAGGACTTGGTTTGGGTGCTTTTGCTCTTGACTGGACGGTTGTTACTTCCTACCTCGAAAGCCCACTTGTTTCGCCGTTCTTTGCAATCGCCAATGTCGCCGTCGGCTACATCTTAATCATCTACGTCATGATGCCTTTGGTGTATTGGGTGTTCAATGTCTATAATGCCAAGACCTTCCCTATCTTCTCCAATGAACTCTTTAATTCCAAAGGTGTGCAATATAATGTAACCGCCATTGTCAACGACAATTTCCAGATTGATTTGGAGCAGTATGCTAAACAAGGTCGTGTGAATCTTAGTGCCTTCTTTGCTATGACCTACGGTATCGGTTTTGCTGCTATTGTTTCTACTTTGTCTCACGTTGCCATTTTTAATGGAAGGGAGATATATCAACAATTCAAAGCTTCGCGTACAGAAATTCAGGACATTCACACCAGATTGATGAAGAAGTATAAGGACATACCGAACTGGTGGTTTTATGTGACTCTTGCGGCCTCATTTGTTCTTTCACTTATACTCTGTATTTTCATGAAGAGTGAAGTACAATTACCTTGGTGGGCACTCATCTTTGCAGCTGGCCTTGCTTTTGTTTTCACTCTTCCCATTAGCATCATAAGGGCCACCACTAATCAGTTTCCAGGATTGAATATCATCAGAGAGTATTTAATGGGTGTGATATCACCAGGCCAACCAATAGCCAACGTTTGCTTCAAGACCTATGGCTACATAAGTATGTACCAGGCTGTCTTCTTCCTAAGCGATTTCAAGCTAGGACATTACATGAAGATTCCCCCACGGTCCATGTTCATTGTTCAGATCATAGGGACTCTTATAGCTGGAACCATCAACATGGGCGTGGCGTGGTGGCTTCTGACTTCAATAAACAACATATGTCATGCGAACGAACTGCCTCCAAACAGTCCATGGACGTGTCCGGGCGATAACGTCTTCTTTGATGCGTCAGTGATTTGGGGTTTGGTTGGTCCAAAACGAATCTTTGGACCTCTTGGGAATTACGCAGCCCTCAACTGGTTCTTCCTTGTGGGTTTATTGGGACCATTAATGGTGTGGCTCCTCCAGAAAGTCTTCCCCAATCAGAAATGGATTTCCCTCATTCACTTTCCAGTGCTCCTCGGCGCAACCGCCATGATGCCACCGGCCACCGCCGTCAACTTCAATTGTTGGATCGTTGTTGGGGTCATATTTAATTACTTCGTCTATAATTATCGTAAGAAATGGTGGCAGCGTTACAATTATGTTCTTTCGGCTGCCTTGGATGCTGGCACCGCCATCATGACGCTTCTTCTCTTCTTCGCTCTTACCATGGAGAATAGGACCTTGGATTGGTGGGGTTCGGCTGGCGAGCACTGTGATCTTGCCACCTGTCCTACGGCCAAGGGTATATCAGCTCCTGATTGTCCTGTACATTGA 2184 0.4721 MGSIKVDPTAVKEDNDESPIEEVRVTVPTDDDPTLPVWTFRMWFLGLISVALLSFINTFFQYRAEPMVVTMISVQIATLPIGKFMAKMLPTTKYRVLGSEFSLNPGPFNVKEHVLISIFANVAGNTAYAVGIVDIIKAFYARKISFLAGWILVITTQVLGYGWAGILKKYVIEPAHMWWPSTLVQVSLFRALHEKDHRRMSRGKFFLIAFVCSLAWYVVPGYLFPTLSSISWVCWVFPKSVTAQQIGSGMQGLGLGAFALDWTVVTSYLESPLVSPFFAIANVAVGYILIIYVMMPLVYWVFNVYNAKTFPIFSNELFNSKGVQYNVTAIVNDNFQIDLEQYAKQGRVNLSAFFAMTYGIGFAAIVSTLSHVAIFNGREIYQQFKASRTEIQDIHTRLMKKYKDIPNWWFYVTLAASFVLSLILCIFMKSEVQLPWWALIFAAGLAFVFTLPISIIRATTNQFPGLNIIREYLMGVISPGQPIANVCFKTYGYISMYQAVFFLSDFKLGHYMKIPPRSMFIVQIIGTLIAGTINMGVAWWLLTSINNICHANELPPNSPWTCPGDNVFFDASVIWGLVGPKRIFGPLGNYAALNWFFLVGLLGPLMVWLLQKVFPNQKWISLIHFPVLLGATAMMPPATAVNFNCWIVVGVIFNYFVYNYRKKWWQRYNYVLSAALDAGTAIMTLLLFFALTMENRTLDWWGSAGEHCDLATCPTAKGISAPDCPVH 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00560 727 PANTHER ISP4 LIKE PROTEIN 12 726 IPR004648 GO:0055085
Accr4g00560 727 NCBIfam small oligopeptide transporter, OPT family 16 695 IPR004648 GO:0055085
Accr4g00560 727 Pfam OPT oligopeptide transporter protein 38 690 IPR004813 GO:0035673
Accr4g00560 727 NCBIfam OPT family oligopeptide transporter 21 691 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00560 Accr-Chr4 5503156 5508689 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00560 13 727 Organic Solute Cotransporters AT5G64410 70.637 0.0 1095
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00560 - - qsa:O6P43_015427 1167.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00560 4 5503156 5508689 Accr4g00560 4 5503156 5508689 ECH