Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00519 ATGGACCTCAAGTTCCTCCCCTCCTTCCTTCTTCTCTCTGCAATCATTCACATCCTCACCATAACCACCATTGCTTCAGACCTCTGTGCCTCTGAACCCTTCCACTTCGACGTCACCCTCATTCCCATTTACTCTAAATGCTCCCCTATCAAACTTCCCAACACTACTGACTCATTATTTAACACCGTCATGGTCATGGCCTCCACAGATTCACAACGCCTCAGTTACTTATCTTCTCTTCTCGCTAAGAAACGCTCAACCTTTGCCCCTGTTGCTTCTGGCCAGGCTCTCAATATCGGTAACTACGTCGTCCGGGCCAAGCTTGGCACTCCCGGTCAGCTCATGTTCATGGTCTTAGACACAAGCAACGATAAGGCCTGGGTCCCATGTACCGGTTGTACCGGATGCTCCGCCGTCACTTTTTCACCCAAAGCTTCTACTACTTTCAGGTCATTGGATTGCTCTGTTCCGCAATGCAGTCAGGTCCGTGGATTCTCTTGCCCCGGCACAATATCCGACCCGTGTTCGTTTAACCATTCGTACGCTGGTTCATCCTTCTCTGCCACGCTGGTCCAAGATTCTCTCAGACTAGGATCTGATGTCATCCCCAATTACGCTTTCGGCTGTGTCAATAACGTCAACGGCAGTTCAATTCCCTCCCAAGGACTACTGGGTCTGGGTCGTGGACCCGTGTCCTTGTTCTCTCAAGTCGGGGCACTTTACAGCGGAGTTTTCTCCTACTGCCTTCCCAGTTTTAGGTCACATTTCTTCTCTGGGTCGCTGAAGCTCGGGCCCAAAGGTCAGCCCAAACGCATCCGTACCACCCCACTATTACGTAATCCCCGCCGGCCGTCTCTGTACTACGTGAACTTGACCGGAATCAGCGTGGGTCGGGTCCTTGTCCGGTTACCAAGTGAGCTTCTGAGCTTCAATCCTTACACCGGAGCTGGAACCATCATAGATTCGGGTACGGTGATTACCCGATTCGTGGGACCAGTGTATAACGCAATCAGGGATGAGTTCAGAAAACAAGTGAGAGGTCCTTTTACGAGCTTGGGGGCATTTGACACTTGCTTCGAGAAGACTTATGAGACAGTGGCACCCATTATTACATTTCAATTCTCAGGGTTGGATCTGGTATTGCCATTGGAGAACAGCTTAATACATAGCAGTTCGACCTCACTAGCCTGCTTGGCAACGGCGGCGTCACCCAATAATGTGAACTCGGTGTTGAATGTGATAGCCAATTTGCAGCAGCAGAACCTTAGGATTTTGTTTGATACTGTCAATAATAAGGTTGGCATAGCTCGTGAGCTCTGTAACTAG 1326 0.5008 MDLKFLPSFLLLSAIIHILTITTIASDLCASEPFHFDVTLIPIYSKCSPIKLPNTTDSLFNTVMVMASTDSQRLSYLSSLLAKKRSTFAPVASGQALNIGNYVVRAKLGTPGQLMFMVLDTSNDKAWVPCTGCTGCSAVTFSPKASTTFRSLDCSVPQCSQVRGFSCPGTISDPCSFNHSYAGSSFSATLVQDSLRLGSDVIPNYAFGCVNNVNGSSIPSQGLLGLGRGPVSLFSQVGALYSGVFSYCLPSFRSHFFSGSLKLGPKGQPKRIRTTPLLRNPRRPSLYYVNLTGISVGRVLVRLPSELLSFNPYTGAGTIIDSGTVITRFVGPVYNAIRDEFRKQVRGPFTSLGAFDTCFEKTYETVAPIITFQFSGLDLVLPLENSLIHSSSTSLACLATAASPNNVNSVLNVIANLQQQNLRILFDTVNNKVGIARELCN 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00519 441 Pfam Xylanase inhibitor C-terminal 287 436 IPR032799 -
Accr4g00519 441 FunFam Aspartyl protease AED3 265 441 - -
Accr4g00519 441 SUPERFAMILY Acid proteases 96 440 IPR021109 -
Accr4g00519 441 FunFam aspartyl protease AED3 81 264 - -
Accr4g00519 441 PANTHER ASPARTYL PROTEASES 34 434 IPR001461 GO:0004190|GO:0006508
Accr4g00519 441 Gene3D Acid Proteases 77 263 IPR021109 -
Accr4g00519 441 Pfam Xylanase inhibitor N-terminal 102 264 IPR032861 -
Accr4g00519 441 Gene3D Acid Proteases 264 441 IPR021109 -
Accr4g00519 441 ProSiteProfiles Peptidase family A1 domain profile. 102 436 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00519 Accr-Chr4 5010495 5011820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00519 93 441 Miscellaneous Gene Families AT1G77480 27.436 2.62e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00519 - - gmx:100788630 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00519 4 5010495 5011820 Accr4g00519 4 5010495 5011820 ECH