Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00518 ATGGGTCTCAAAGCATTTGTTGAAGGCGGCATTGCCTCCACTGTTGCCGGCTGTACAACTCATCCACTCGATCTCATCAAAGTTCGCTTGCAGCTTCAGGGCGAGAAACACTCTGTTCCTGTGAGGCCTCAGCCAGTAGAGAATCTGCGTACAGCTTATGCCTTTCACTCACATTCTTCGGCAACGGCTGCTCCTCCGGCCACACTTGGTATTCAACCTCGCGGCGGACTCATATCTGTTGGTGTTCGGATTGTGCAGTCCGAAGGCGTGGCTGCCCTATTTTCCGGCGTATCCGCCACAGTTCTCCGCCAAGCACTTTATTCCACTACCCGTATGGGTCTATACGATGTGATCAAGCACAAATGGACCGATCCAGATACGGGCAAGATGCTCCTGACCCGAAAGGTAGCTGCGGGGCTAATCGCCGGCGGGATAGGTGCAGCCATTGGAAACCCTGCTGATGTGGCCATGGTTCGGATGCAAGCCGATGGTCGGCTTCTGACGGCTCAACGGCGCGGTTATAAGAACGTGTTTGATGCAATCGCGCGCCTGGTGAGTCAGGAAGGAATTGCTAGCCTGTGGCGTGGTTCGGCTCTTACGGTGAACCGTGCGATGATCGTGACAGCTTCTCAATTGGCTTGTTATGATCAATTCAAGGAGATGATTCTGGGGAAGGGACTGATGAAGGATGGCCTTCGGACCCATGTCACGGCAAGCTTAGCGGCGGGGTTTGCGGCAGCGGTGGCGTCGAATCCGGTGGATGTGATAAAGACAAGGGTGATGAACATGAATGTTGAGGCAGGGGCAACCCCACCGTATAATGGAGCCTTGGATTGTGCAGTCAAGACGTTGAAGGCTGAAGGACCTATGGCTTTATATAAGGGATTTGTCCCCACAATATCTAGGCAGGGACCATTTACCGTGGTGCTATTTGTGACCCTCGAACAAGTGAGGAAGTTGCTGAAGGAATTTTGA 975 0.5313 MGLKAFVEGGIASTVAGCTTHPLDLIKVRLQLQGEKHSVPVRPQPVENLRTAYAFHSHSSATAAPPATLGIQPRGGLISVGVRIVQSEGVAALFSGVSATVLRQALYSTTRMGLYDVIKHKWTDPDTGKMLLTRKVAAGLIAGGIGAAIGNPADVAMVRMQADGRLLTAQRRGYKNVFDAIARLVSQEGIASLWRGSALTVNRAMIVTASQLACYDQFKEMILGKGLMKDGLRTHVTASLAAGFAAAVASNPVDVIKTRVMNMNVEAGATPPYNGALDCAVKTLKAEGPMALYKGFVPTISRQGPFTVVLFVTLEQVRKLLKEF 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00518 324 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 4 320 - -
Accr4g00518 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 130 221 IPR018108 -
Accr4g00518 324 SUPERFAMILY Mitochondrial carrier 4 317 IPR023395 -
Accr4g00518 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 230 320 IPR018108 -
Accr4g00518 324 FunFam Mitochondrial uncoupling protein 5 4 324 - -
Accr4g00518 324 Pfam Mitochondrial carrier protein 132 224 IPR018108 -
Accr4g00518 324 Pfam Mitochondrial carrier protein 234 322 IPR018108 -
Accr4g00518 324 Pfam Mitochondrial carrier protein 4 122 IPR018108 -
Accr4g00518 324 PRINTS Mitochondrial brown fat uncoupling protein signature 115 127 IPR002030 GO:0006839|GO:0031966
Accr4g00518 324 PRINTS Mitochondrial brown fat uncoupling protein signature 227 245 IPR002030 GO:0006839|GO:0031966
Accr4g00518 324 PRINTS Mitochondrial brown fat uncoupling protein signature 184 201 IPR002030 GO:0006839|GO:0031966
Accr4g00518 324 PRINTS Mitochondrial brown fat uncoupling protein signature 309 324 IPR002030 GO:0006839|GO:0031966
Accr4g00518 324 Gene3D Mitochondrial carrier domain 4 323 IPR023395 -
Accr4g00518 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 121 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00518 Accr-Chr4 5008384 5009358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00518 1 323 Miscellaneous Gene Families AT5G09470 56.034 7.77e-118 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00518 K15104 - vvi:100245527 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00518 4 5008384 5009358 Accr4g00518 4 5008384 5009358 ECH