Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00516 ATGCCTAACAAAACTCCGGAAGTGTCTCAGGGAGATGGCGGTACTTCTTTACCCTCTTCTCAGCCTGGGCCACCAGAGCATCAGCGTTCGCGTGGCAGCAATGGCAATACGATTTTCAAGAGTGGGCCACTTTACATATCTTCAAGAGGAATTGGATGGACATCTTGGAAGAAACGGTGGTTTGTTTTAACACGCACTTCACTGGTTTTCTTCAGAAGTGATCCGAATGTTATTCCTCAAAAGGGGGGTGAAGTGAATTTAACGCTTGGTGGCATTGACCTCAACAATTCAGGCAGTGTTGTTGTCAAAGCAGATAAGAAACTTTTGACCGTGCTTTTTCCTGATGGACGAACTTTCACACTTAAGGCTGACACTGTAGAGGACTTACATGAATGGAAGACTGCACTTGAGAATGCGTTGGCCCTAGCCCCAGGCGCCTCTGATGTAACTGGGGAAAATGGTATCTTTAGGAACGATCAGACTGATTCAATTGATATTTCTTTGGACCAGTCGAAGGATGTAGAACCAGCAAAATCAACAGTTGTTGGCCTGCCAATTTTACTTGCTTTGGAGGAGGATGATGGAGCTCCATCGTTTTTGGAGAAAGCACTGAGGTTCATAGAAGTTCATGGGGTCAAAGTTGAAGGGATCTTGCGACAGGCAGCTTCTGTTGATGATGTTGAATGTCGAGTTCGGGAATATGAACAGGGAAAAACTGAATTCTCTGCTGATGAGGATCCGCATGTTGTTGCCGATTGTTTGAAGTATGTACTCAGGGAATTACTTTCATCTCCAGTCCCCGCATCTTGCTGCAAGGCTCTGTTAGAAGCATGCCGGACTGAACGTGCTGGTAGGATTTCTGCTATCCGTGCTGCAATATGTGAGACTTTCCCTGAACCAAATCGCCGTTTATTGCAAAGAATACTCCAAATGATGCAAACCGTGGCTTCCCACAAAACTGTGAATAGAATGAGCTCCTCTGCTGTGGCAGCTTGCATGGCACCCTTAATTCTTCGTCCCCTTCTGGCTGGGGAATGCAACATTGAAAATGATTTTGATGTGGGGGGTGATGGTTCTGTTCAACTTCTACAAGCAGCCGCCGCCGCCAACCATGCTCAAACAATTGTTATAACATTATTAGAAGAATATGACAGCATATTTGGGGAGGAAGGATCTGGATCCCCAGGCATATACTCTGATTCAGAAGAGAGTGGATCTGGGAGCGAGGAGGGTACTGAAGATGAATCTTATGATGACAATGATGATGATGATGAGTGTGATGAAGAATCAATACAAGAGTCCGATGCAGATGCAGAGGGCAGTGAGATTGAAGACTCAGGCGGCGAGGATGATAAGAACCGTGATCACTCAAGGTCAGATGTAAAACCCTCAGGTGACAATGAAGATCCTAAAGTCAACCAGATATCATCACAGCCTAGTGAAGTCTCACTATCTCAGGACGTTGACATCAAGAGCCAGGAAAATCTGACGAGTTCAGCCAGGACTGCTCGTGCGGAGAAGTCCAGCACACCTGCAAACATAGTTGAAGTTGTTTCCACTGACCAGAGTACAGTACATAATTCAAGTCGTCCTATTGACAACAAATCAACAGACATATCTGATGATCCAGCGCATGCTTCGAGCCATGCAATCTTGGGACGTACTTCTGCAATGAAGAATCATGCCACGGAAACTGTTGATTCTTCTACCATTGCAGCTGAGATGGACAATCTTGAAGCTATCAAGGTAGAATTGCAAAACAAAATCACAGAGGAGTCTAACGCAAACCTGCAATCTTATCTGGAAAAACAAAAGAAATTCATGCATGAGCGTCAGCTGGCTCTTGAACAAGATGTGGCTAGACTACGGGAACAGTTGCAAAAGGAGAAGAATTATTGGGCAACTCTAGAAGCAGGAAACGAGTATTCTCCTGGATCCTTATCCAATTCAACCAGTGATGAAAAGACTAAGGCAGACCTTGAGGAAATAACTCTCATAGAAGCAGATCTCACCAAGTTACAGCAGCGGATCGATCATGTTGGCAGGAGGTTTAATGTACAACATGAGCACACTTCAAATCACGAAACAAAATTGAAGAATAAGCTGGATACCGAAGATGCAGTTACTTCTCAGTCTCAGATTGAAAGGTCAAAACGCAAGGACGTTCAGTTTGGTGGAACCGAAAGTGAGAATGAGAAAAAGTCGGAACCAACATCTTTACTGAACAAATATGCACCTCAAGCTACTCCGAAAAAAGTTGGGGGAAAGGTTGAGCAGGTATCAAACTTCACTACTTCTAGACTGACTAAACTGTCCACCAGACTAAACTTTCTGAAGGAGCGTCGAAATCAAATTCAGCAGTCACAGCCACCACTCAATAATAAGCCTCGAGGATCTGAAGCCCATTCTGTATCTAACCCAGAAAAGGGTAGAGCCATGGACAGTTCCCAGCCACCCTCAATTGCAGATAAAGGTTCGAGCAAAGAACCTGAATCGCTTCAAAATTCAGACAAAATGAGAAAATCAGATGGTCAGTGA 2538 0.4456 MPNKTPEVSQGDGGTSLPSSQPGPPEHQRSRGSNGNTIFKSGPLYISSRGIGWTSWKKRWFVLTRTSLVFFRSDPNVIPQKGGEVNLTLGGIDLNNSGSVVVKADKKLLTVLFPDGRTFTLKADTVEDLHEWKTALENALALAPGASDVTGENGIFRNDQTDSIDISLDQSKDVEPAKSTVVGLPILLALEEDDGAPSFLEKALRFIEVHGVKVEGILRQAASVDDVECRVREYEQGKTEFSADEDPHVVADCLKYVLRELLSSPVPASCCKALLEACRTERAGRISAIRAAICETFPEPNRRLLQRILQMMQTVASHKTVNRMSSSAVAACMAPLILRPLLAGECNIENDFDVGGDGSVQLLQAAAAANHAQTIVITLLEEYDSIFGEEGSGSPGIYSDSEESGSGSEEGTEDESYDDNDDDDECDEESIQESDADAEGSEIEDSGGEDDKNRDHSRSDVKPSGDNEDPKVNQISSQPSEVSLSQDVDIKSQENLTSSARTARAEKSSTPANIVEVVSTDQSTVHNSSRPIDNKSTDISDDPAHASSHAILGRTSAMKNHATETVDSSTIAAEMDNLEAIKVELQNKITEESNANLQSYLEKQKKFMHERQLALEQDVARLREQLQKEKNYWATLEAGNEYSPGSLSNSTSDEKTKADLEEITLIEADLTKLQQRIDHVGRRFNVQHEHTSNHETKLKNKLDTEDAVTSQSQIERSKRKDVQFGGTESENEKKSEPTSLLNKYAPQATPKKVGGKVEQVSNFTTSRLTKLSTRLNFLKERRNQIQQSQPPLNNKPRGSEAHSVSNPEKGRAMDSSQPPSIADKGSSKEPESLQNSDKMRKSDGQ 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00516 845 SUPERFAMILY PH domain-like 12 141 - -
Accr4g00516 845 Gene3D Rho GTPase activation protein 166 389 IPR008936 -
Accr4g00516 845 Coils Coil 612 632 - -
Accr4g00516 845 Pfam RhoGAP domain 197 340 IPR000198 GO:0007165
Accr4g00516 845 MobiDBLite consensus disorder prediction 684 704 - -
Accr4g00516 845 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 16 735 - -
Accr4g00516 845 MobiDBLite consensus disorder prediction 684 758 - -
Accr4g00516 845 CDD PH 40 136 - -
Accr4g00516 845 ProSiteProfiles Rho GTPase-activating proteins domain profile. 182 387 IPR000198 GO:0007165
Accr4g00516 845 ProSiteProfiles PH domain profile. 37 141 IPR001849 -
Accr4g00516 845 MobiDBLite consensus disorder prediction 809 829 - -
Accr4g00516 845 SMART RhoGAP_3 194 384 IPR000198 GO:0007165
Accr4g00516 845 MobiDBLite consensus disorder prediction 830 845 - -
Accr4g00516 845 MobiDBLite consensus disorder prediction 469 534 - -
Accr4g00516 845 MobiDBLite consensus disorder prediction 406 446 - -
Accr4g00516 845 Pfam PH domain 40 140 IPR001849 -
Accr4g00516 845 SUPERFAMILY GTPase activation domain, GAP 192 389 IPR008936 -
Accr4g00516 845 MobiDBLite consensus disorder prediction 388 565 - -
Accr4g00516 845 SMART PH_update 38 143 IPR001849 -
Accr4g00516 845 Pfam Leucine-zipper of ternary complex factor MIP1 609 683 IPR025757 -
Accr4g00516 845 MobiDBLite consensus disorder prediction 712 737 - -
Accr4g00516 845 MobiDBLite consensus disorder prediction 782 845 - -
Accr4g00516 845 MobiDBLite consensus disorder prediction 782 801 - -
Accr4g00516 845 Coils Coil 768 788 - -
Accr4g00516 845 MobiDBLite consensus disorder prediction 1 36 - -
Accr4g00516 845 MobiDBLite consensus disorder prediction 447 467 - -
Accr4g00516 845 Gene3D - 26 142 IPR011993 -
Accr4g00516 845 CDD RhoGAP 197 350 - -
Accr4g00516 845 Coils Coil 575 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00516 Accr-Chr4 4995269 5007632 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00516 - - qsa:O6P43_015375 850.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00516 4 4995269 5007632 Accr4g00516 4 4995269 5007632 ECH