Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00478 ATGGCCGTCGCCACTACCAACTCTCTCATTCCCAACAAGTCCTTTCTCCCTTCTCATTCCCCTCTTCCTTCCTCCAAAGTCAACCCATCTTCCCTCCCCAATAATAAGCCCAGGCCTTCCCCTTCCATTCTCGCCGTTCACGCGGCCGAGCCCACCAAGCCCCAAGCGACGGCCACCACGGCAGTGTCCTCATCTGCGACGACGATTGCATCCCCTAATGTGGGTCGGGGAAAATGGAGCCTCGACAGTTGGAAATCTAAGAAAGCTCTTCAGCAACCTGAGTACCCGAATAAAGAGGAGCTGGAATCGGTTCTTCGGACGATCGAAGCGTTCCCTCCTATCGTGTTTGCCGGAGAGGCCAGGAGCTTGGAGGAACGTCTGGCCGAGGCTGCCATGGGAAATGCTTTTCTTCTTCAGGGTGGCGATTGTGCCGAGAGTTTCAAGGAATTCAATGCCGTGAACACTCGTGACACCTTCAGAATTCTTCTTCAGATGAGCGTTGTTATGATGTTCGGAGGCCAAATGCCCGTCATTAAGGTAGGAAGGATGGCGGGGCAGTTTGCAAAACCCAGATCGGAACCGTTCGAGGAGAAAGACGGCGTGAAGCTTCCGAGTTACCGAGGGGATAATATAAACGGAGATTCTTTTGATGAGAAGTCAAGAATTCCGGATCCACAAAGGATGATAAGAGCGTACTGTCAATCGGCAGCCACCCTTAACCTTCTTCGAGCTTTTGCCACCGGTGGTTATGCTGCTATGCAAAGGGTTACTCAATGGAATTTGGACTTCACAGAGCAGAGCGAGCAAGGAGACAGGTACCGAGAGCTTGCTCTACGAGTTGATGAGGCTCTTGGATTCATGGCTGCAGCTGGGCTGACTGTGGACCATCCTATAATGAAAACAACAGAGTTCTGGACTTCTCATGAATGCTTGTTATTGCCTTATGAACAATCACTCACTAGGTTGGATTCCACTTCCGGACTCTACTATGACTGCTCCGCCCATATGCTTTGGGTTGGGGAGCGGACCAGGCAGTTGGATGGTGCCCATGTTGAGTTTCTGAGAGGAATTGCTAATCCTCTAGGGATTAAGGTAAGTGATAAGATGAATCCAAATGAGCTTGTTAAGCTCATTATGATTTTGAATCCCCAAAACAAACCAGGAAGAATAACTGTGATCACAAGGATGGGAGCTGAAACTATGAGAGTGAAGCTTCCACATCTAATCAGGGCAGTTGAAAGAGCTGGGCTAATTGTCACATGGATCACCGATCCAATGCATGGAAACACCATCAAGGCTCCTTGCGGTCTTAAAACTCGCCCCTTTGATGCCATCAGGGCGGAGGTGAGAGCATTCTTTGATGTGCACGAACAAGAAGGAAGCCACGCAGGAGGAGTTCATCTGGAGATGACGGGTCAGAATGTGACGGAGTGCATCGGCGGGTCAAGGACGGTCACCTTTGACGACCTCAACTCCCGTTATCACACACACTGTGACCCAAGGCTCAATGCTTCTCAGGCTCTCGAGCTTGCCTTCATCATCGCCGAACGGCTTAGGAAGAGCAGGATGAGATCTCAAAAGTTATTTGGTTCCCAGTAA 1599 0.5028 MAVATTNSLIPNKSFLPSHSPLPSSKVNPSSLPNNKPRPSPSILAVHAAEPTKPQATATTAVSSSATTIASPNVGRGKWSLDSWKSKKALQQPEYPNKEELESVLRTIEAFPPIVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNAVNTRDTFRILLQMSVVMMFGGQMPVIKVGRMAGQFAKPRSEPFEEKDGVKLPSYRGDNINGDSFDEKSRIPDPQRMIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEQSEQGDRYRELALRVDEALGFMAAAGLTVDHPIMKTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMNPNELVKLIMILNPQNKPGRITVITRMGAETMRVKLPHLIRAVERAGLIVTWITDPMHGNTIKAPCGLKTRPFDAIRAEVRAFFDVHEQEGSHAGGVHLEMTGQNVTECIGGSRTVTFDDLNSRYHTHCDPRLNASQALELAFIIAERLRKSRMRSQKLFGSQ 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00478 532 MobiDBLite consensus disorder prediction 1 42 - -
Accr4g00478 532 NCBIfam 3-deoxy-7-phosphoheptulonate synthase class II 79 521 IPR002480 GO:0003849|GO:0009073
Accr4g00478 532 SUPERFAMILY Aldolase 76 519 - -
Accr4g00478 532 MobiDBLite consensus disorder prediction 1 33 - -
Accr4g00478 532 Gene3D Aldolase class I 112 276 IPR013785 -
Accr4g00478 532 Gene3D Aldolase class I 277 520 IPR013785 -
Accr4g00478 532 FunFam Phospho-2-dehydro-3-deoxyheptonate aldolase 268 520 - -
Accr4g00478 532 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 41 527 IPR002480 GO:0003849|GO:0009073
Accr4g00478 532 Pfam Class-II DAHP synthetase family 79 515 IPR002480 GO:0003849|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00478 Accr-Chr4 4625291 4628620 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00478 K01626 - qsa:O6P43_019624 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00478 4 4625291 4628620 Accr4g00478 4 4625291 4628620 ECH