Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00448 ATGCAGCTGTCAGCCATTTTCCTTGCGTCCTTGCTTCTGCTCTCTGAACAGGTGGCCCCTGCCGAGTTCACTCAGTCGCCGCCTCCTTTTGGCTGTGACCCGTCCAATCCAGCCACCACATCCTACCCATTCTGCAACTCCAAGCTCAGCGTGTCTCGAAGAGCCAAAGACCTTGTTTCTCGCCTCTCATTGGACGAGAAGCTCGCTCAACTAGTGAACAACGCTCCTCCCATTCCTCGCCTTGGGATCCCAGCTTACCAATGGTGGAATGAGGCCTTACACGGAGTCTCCAACGTCGGACGTGGAATCCGATTCAATGCCTCCATTACTTCTGCTACCAGCTTCCCTCAAGTCATCCTCTCCGCTGCTACCTTCGATTCCCACCTCTGGTACAGAATCGGTCAGGCCATTGGAACGGAAGCGAGGGCAATCTATAATGCTGGGCAAGCCACGGGCATGACATTTTGGGCTCCGAACATTAACATCTTTAGGGATCCAAGATGGGGGAGAGGGCAAGAGACGGCCGGCGAAGACCCACAGGTTAGCTCCAAGTACGCTGTGTCGTATGTGAGGGGGGTACAAGACGATTCCTTCCAAGGAGGCAAACTCACAGGTCATCTTCAAGCTTCTGCTTGTTGCAAGCATTTCACCGCCTACGATTTGGATAACTGGAAGGGTGTGAATCGCTTCGTCTTCGATGCTCGCGTCACTTTGCAAGATTTAGCGGACACATATCAGCCTCCATTTCAGAGTTGCATAGAGCAAGGACGAGCAAGTGGGATAATGTGCGCTTATAATCGAGTGAATGGGGTTCCAAACTGCGCAGATTTCAATCTCTTAACTAAAACCGCCAGAAAACAATGGGGTTTTCATGGGTACATCACTTCCGATTGTGGCGCAGTCTCACTCCTTCATCATAATCAAGGATATGCGAAATCGGCAGAGGATGCTGTGGCCGACGTCCTCCGGGCTGGAATGGACGTAGAGTGTGGTGATTACTTGACGAAGTATGCTAAATCAGCAGTGGTGCAGAAAAAACTACCAATAACTCAAGTAGATCGCGCACTTCACAACCTGTTCTCAATAAGAATGAGGCTGGGTCTATTGGACGGGAATCCGGCCAAACTCTTGTTCGGCACGATCGGTCCTAATCAAGTGTGTTCAAAAGATCACCAGTATTTAGCTCTTGAAGCTGCCAGAAATGGCATTGTCCTTTTGAAGAACTCTGCCAGACTTCTCCCACTCCCTAAAACAATTTCCCTTGCACTCATAGGTCCTAACGCCAATGCTTCCCCTTTAACTCTCCTAGGAAACTATGCAGGCCCTCCCTGTAAACTTGTAACGCCATTGCAGGCCTTTCAGCAGTATGTTAAGAACACCATTTATCACCCCGGTTGTGATGACGGCGTCAAGTGTTCTTCGGCTCAGATTGGCAAGGCCGTGGAAATCGCCGCGAAGGTGGATTACGTGGTGCTGATGATGGGTTTGGATCAAAGTCAGGAGAGGGAAGATCGTGATCGGGTTCACCTGGACTTACCTGGCAAGCAGCTGGAACTCATACACAGCGTTGCTAAGGCTTCCAAGAGGCCTGTCATTTTAGTGATCTTTTCCGGTGGCCCCCTTGACATTTCTCCGGCCAAGAATAACAACAAAGTTGGAGGCATCCTCTGGGCCGGTTATCCCGGAGAAGCTGGAGGAACCGCACTGGCTCAGATTATCTTTGGCGATCACAACCCAGGAGGAAGATTACCAGTGACTTGGTACCCAAAAGATTTCATAAGAGTGCCAATGACAGACATGAGGATGCGAGCTGATCCATCTTCTGGGTATCCGGGACGGACTTACCGGTTTTACACGGGTCCAAAGGTGTATGAGTTCGGGTATGGCCTAAGCTACTCTAGACATTCGCACGAGTTCGTCTCTGTCACGCAGAACAAACTTCACTTGAATCAATCGTGGCCTTATTTGTTAGTTGAGAATTGGGAGACAATTCGCATCAAATCAGTAGCAGAGATGGGTGCAAAATTGTGCGAAAGCATGTCAGTGTCAGTGACGGTGGCAGTAAAAAACCATGGAAGTATGGAGGGGAAGCATTCGGTGTTGTTATTTACAAGGCATGCAAAACAGAGAAGTGGGAATCCGATCAAACAGTTGGTGGGCTTTGAGAGTGTGATGTTAGGTGCAGGGGAAAGTGCTCAAGTTGGATTTGAGGTAAGGCCTTGTGAACATCTTAGCAGAGCAAGCGAGGGTGGGTCCAAAGTCATTGAAGAAGGGTCCCACTTTTTGCTTGTGGGGGATGAAGAGTATCAAATTGACGTCATTTTCTGA 2328 0.4961 MQLSAIFLASLLLLSEQVAPAEFTQSPPPFGCDPSNPATTSYPFCNSKLSVSRRAKDLVSRLSLDEKLAQLVNNAPPIPRLGIPAYQWWNEALHGVSNVGRGIRFNASITSATSFPQVILSAATFDSHLWYRIGQAIGTEARAIYNAGQATGMTFWAPNINIFRDPRWGRGQETAGEDPQVSSKYAVSYVRGVQDDSFQGGKLTGHLQASACCKHFTAYDLDNWKGVNRFVFDARVTLQDLADTYQPPFQSCIEQGRASGIMCAYNRVNGVPNCADFNLLTKTARKQWGFHGYITSDCGAVSLLHHNQGYAKSAEDAVADVLRAGMDVECGDYLTKYAKSAVVQKKLPITQVDRALHNLFSIRMRLGLLDGNPAKLLFGTIGPNQVCSKDHQYLALEAARNGIVLLKNSARLLPLPKTISLALIGPNANASPLTLLGNYAGPPCKLVTPLQAFQQYVKNTIYHPGCDDGVKCSSAQIGKAVEIAAKVDYVVLMMGLDQSQEREDRDRVHLDLPGKQLELIHSVAKASKRPVILVIFSGGPLDISPAKNNNKVGGILWAGYPGEAGGTALAQIIFGDHNPGGRLPVTWYPKDFIRVPMTDMRMRADPSSGYPGRTYRFYTGPKVYEFGYGLSYSRHSHEFVSVTQNKLHLNQSWPYLLVENWETIRIKSVAEMGAKLCESMSVSVTVAVKNHGSMEGKHSVLLFTRHAKQRSGNPIKQLVGFESVMLGAGESAQVGFEVRPCEHLSRASEGGSKVIEEGSHFLLVGDEEYQIDVIF 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00448 775 Gene3D Immunoglobulins 664 774 IPR013783 -
Accr4g00448 775 FunFam probable beta-D-xylosidase 2 388 633 - -
Accr4g00448 775 Pfam Glycosyl hydrolase family 3 N terminal domain 109 359 IPR001764 GO:0004553|GO:0005975
Accr4g00448 775 Pfam Fibronectin type III-like domain 699 766 IPR026891 -
Accr4g00448 775 PRINTS Glycosyl hydrolase family 3 signature 115 134 IPR001764 GO:0004553|GO:0005975
Accr4g00448 775 PRINTS Glycosyl hydrolase family 3 signature 283 301 IPR001764 GO:0004553|GO:0005975
Accr4g00448 775 PRINTS Glycosyl hydrolase family 3 signature 209 225 IPR001764 GO:0004553|GO:0005975
Accr4g00448 775 Pfam Glycosyl hydrolase family 3 C-terminal domain 403 632 IPR002772 GO:0004553|GO:0005975
Accr4g00448 775 SMART Fn3_like_2 698 768 IPR026891 -
Accr4g00448 775 Gene3D - 388 633 IPR036881 GO:0004553|GO:0005975
Accr4g00448 775 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 403 634 IPR036881 GO:0004553|GO:0005975
Accr4g00448 775 SUPERFAMILY (Trans)glycosidases 42 401 IPR017853 -
Accr4g00448 775 FunFam probable beta-D-xylosidase 7 54 375 - -
Accr4g00448 775 Gene3D - 54 376 IPR036962 GO:0004553|GO:0005975
Accr4g00448 775 PANTHER SUGAR HYDROLASE-RELATED 26 771 IPR044993 GO:0009044|GO:0045493
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00448 Accr-Chr4 4291213 4295158 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00448 26 773 Glycoside Hydrolase AT1G78060 64.542 0.0 1009
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00448 - - aprc:113867121 1268.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00448 4 4291213 4295158 Accr4g00448 4 4291213 4295158 ECH