LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr4g00431	ATGGAAAAGAAAGAGTTAATGGAGACAATCGAATCAAATTCTCAAGCCGTTCAAAAGCTGGAAGATGTTCCCACTTTCCAGAATGAAAAGGCCAAATCGCCAGAAGAGGTAAAAAGTCAAAATATTGGCAGTGATGATCTCGCGTCTGACAATAGACACGCAGATGAGCATAAGAGTAATGTCATGAAGACAGAAACCGACGATGAATCCTTCAATAACGTTGGACAAAATCCCTCCGTTGATAATGTCGATGGCAGCAAAGTGTCTGAGCTTTACAGTCAAGGAGGAATTGTAGATATGACTTCTGGACAAGATGACTTGGCCAAAGGGATGAACGAGGGTGGGGACGTTGAATCCACACGAATTAATCAGAAGATAGATGAAATTCTTAGTGAAGACAATAATCTAGAGCCCGTGTTTGACGGAACAGAGGTTCCTGGTATGGAAGCCAGCAGAAGCACGGATAACTGTTCTTTGGACTTGAATGCTGATCATGATACTCAAGGAGTGGTTGAGAAGGCTGTGGCACTTAAAAATTTTGTTAGGGAGAGAAGTGCTGTTGCAGTCTCTACTGTGCTACGTCGCCTTTCTGGGAAAGGTGACGAAGGTTCCATGAGCAATTCTGATGATGAAAGTAAGAATGCTTCTGAATCCTTAAATGTGGATTCTACTGAGAAAAAATCTTGGAACCCCCTAAATTATATTAGGAGGTCATTTGATGCTGAGTCGGAAGGCAAAAATGAATGTAGGGTACCAATAACCGGAGGTCCTCACTATCCCATAGTCATGAAAGGAAGGATTATACTCTACACAAGACTAGGGTGCCAGGAATCTAAAATAGTAAGGCTATTTTTGTATATGAAACGGCTTAGGTACGTTGAAATCAATATTGACGTGTACCCTAGTAGAAAGCAGGAGCTTGACAAGATTTCTGGATCTACTTCTGTTCCCAAGGTGTTTTTCAATGAAATACTTATTGGTGGTCTGAATGAGCTAAAGTCCCTGGATGAATCTGGTCAGCTCGATGAGAAGATTGAATTTCTCATTACTGAAGCGCCGTCAATTGAAGCTCCGTTGCCGCCTCTTTCTGAAGAGGATGATGCGTCTAGTAGTGGTGCTCTCGATGAAATGGCTTTAATTGTCAGCAAAATGAAAGAATCTATTGTTGTGAAAGACCGATTTTACAAAATGCGGAGGTTCACCAAGTGTTTTCTTGGCTCCGAAGCTGTGGACTTCTTATCAGAAGATCAATACTTGGAAAGACAGGAGGCTGTTGAGTTTGCACGAAATCTTGCTAGCAAATTCTTCTTCCAACATGTTCTTGATGAGAATCTGTTTGAGGATGGCAACCACTTGTATCGTTTTTTGGATGATGACCCGGTGGTGGCTTCTAAATGTTTCAATATCCCGAGGGGCTTAACCACTGTGCAGCCGAAGCCTATAATAGAAATTGCATCAAGGCTGAGGTTTTTGTCTCGTGCAATATTTGAAGCCTATGTTTCTGAAGATGGACATCATGTTAATTACAGAAGTTTCCATGGAAGCGAGGAGTTTGCAAGGTATCTGAGAATAGTAGAGGAGCTCCAAAGAGTGGAAATGAGGGATATATCTAGAGAAGAGAAGCTAGCTTTCTTCATCAATCTCTATAATATGATGGCCATTCATGCAATCTTAGAATGGGGTCATCCGGCTGGAGAACTGGAGAGGAGAAAATTGTTTGGAGACTTTAAATATGTGATCGGTGGATCCACTTACTCACTTTCAGCCATTCAAAATGGCATTTTAAGGGGGAACCAGCGGCCACCATACAACCTTAGGAAGCCATTTGGTGCAAAAGATAAACGTGCGAGTGTGGCTCTTCCCTACTCTGAGCCTCTTGTTCATTTTGCTTTAGTATGCGGTACCAGATCTGGGCCTGCACTTAGATGCTATTCTCCTCGAGATATTGACAAAGAATTAGTGGACTCTGCTCGCAATTTCTTGAGAAGTGGTGGACTTCTCATTGATTTGAATACGAAGGTCGCTCGTGCTAGTAGGATCCTTAAGTGGTTTAGTGGAGATTTTGGCAAGAGCGATGCAGAGGTGCTGAGGCATGTGTCAAATTACTTAGACCCAGCTGACGCAGAAGTATTGTTGGATCTGCTTGCCACTTCTGAAGTGAAGGTGATCCATACCCCTTATGACTGGGCTTTAAACGACTAA	2202	0.4255	MEKKELMETIESNSQAVQKLEDVPTFQNEKAKSPEEVKSQNIGSDDLASDNRHADEHKSNVMKTETDDESFNNVGQNPSVDNVDGSKVSELYSQGGIVDMTSGQDDLAKGMNEGGDVESTRINQKIDEILSEDNNLEPVFDGTEVPGMEASRSTDNCSLDLNADHDTQGVVEKAVALKNFVRERSAVAVSTVLRRLSGKGDEGSMSNSDDESKNASESLNVDSTEKKSWNPLNYIRRSFDAESEGKNECRVPITGGPHYPIVMKGRIILYTRLGCQESKIVRLFLYMKRLRYVEINIDVYPSRKQELDKISGSTSVPKVFFNEILIGGLNELKSLDESGQLDEKIEFLITEAPSIEAPLPPLSEEDDASSSGALDEMALIVSKMKESIVVKDRFYKMRRFTKCFLGSEAVDFLSEDQYLERQEAVEFARNLASKFFFQHVLDENLFEDGNHLYRFLDDDPVVASKCFNIPRGLTTVQPKPIIEIASRLRFLSRAIFEAYVSEDGHHVNYRSFHGSEEFARYLRIVEELQRVEMRDISREEKLAFFINLYNMMAIHAILEWGHPAGELERRKLFGDFKYVIGGSTYSLSAIQNGILRGNQRPPYNLRKPFGAKDKRASVALPYSEPLVHFALVCGTRSGPALRCYSPRDIDKELVDSARNFLRSGGLLIDLNTKVARASRILKWFSGDFGKSDAEVLRHVSNYLDPADAEVLLDLLATSEVKVIHTPYDWALND	733

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr4g00431	733	Gene3D	Glutaredoxin	262	347	-	-
	Accr4g00431	733	MobiDBLite	consensus disorder prediction	1	86	-	-
	Accr4g00431	733	PANTHER	ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE	13	732	-	-
	Accr4g00431	733	MobiDBLite	consensus disorder prediction	198	224	-	-
	Accr4g00431	733	SMART	DEP_3	384	457	IPR000591	GO:0035556
	Accr4g00431	733	Pfam	Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)	388	455	IPR000591	GO:0035556
	Accr4g00431	733	ProSiteProfiles	DEP domain profile.	384	457	IPR000591	GO:0035556
	Accr4g00431	733	Pfam	Glutaredoxin	267	323	IPR002109	-
	Accr4g00431	733	CDD	DEP	380	454	-	-
	Accr4g00431	733	SUPERFAMILY	Thioredoxin-like	262	346	IPR036249	-
	Accr4g00431	733	Coils	Coil	3	23	-	-
	Accr4g00431	733	Gene3D	-	372	462	IPR036388	-
	Accr4g00431	733	MobiDBLite	consensus disorder prediction	48	65	-	-
	Accr4g00431	733	MobiDBLite	consensus disorder prediction	209	224	-	-
	Accr4g00431	733	SUPERFAMILY	"Winged helix" DNA-binding domain	378	464	IPR036390	-
	Accr4g00431	733	ProSiteProfiles	Glutaredoxin domain profile.	255	352	-	-
	Accr4g00431	733	MobiDBLite	consensus disorder prediction	66	86	-	-
	Accr4g00431	733	Pfam	Protein of unknown function, DUF547	534	661	IPR006869	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr4g00431	Accr-Chr4	4145240	4149556	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr4g00431	-		-	tpra:123896937	946.806

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Accr3g00362	3	3941130	3945798	Accr4g00431	4	4145240	4149556	CCT
	Accr4g00431	4	4145240	4149556	Accr4g00431	4	4145240	4149556	ECH