Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00407 ATGCATCCCTTTTGCTGTGTCTCCGCCGTTTCTGATCAGTCTTCACCGGTCAAACCCTCTCCTGCTCCCTTCCCTAGCTTCCACATGCCTCCTCCTCTTCCTCCCGCCGCCCCTGCCTCTGCCATTCGATCCGATTCGGTTCCCCGCACCAATAACCACAACCACACCTATAGTAATCACGGCTTCGGCGACTATGGGCGGCTGAGTCCGCGAGAGCTGTCACAACCGGCGGTGGATGTGAAGATCAATGACTTGGTTGGGAATGGAATCTCAGGGATATTGTATAAGTGGGTCAATTACGGTAAAGGCTGGAGGCCTCGATGGTTCGTCCTTCAAGACGGCGTACTTTCTTACTATAAGATCCACGGGCCCGATAAGATCGTCGTCAATAAAGAAACCGAGAAGGGTTCTAAGGTCATTGGCGAAGAATCCATGCGAACGATCTCGCGCAACCGCAATTCTTATTCCTCTCATCAGCAGTCCCTCCATCGACGAAAGCCCTTTGGAGAAATCCATCTCAAGGTTTCAACTATTCGCGAAAGCAGGTCAGATGACAAGCGGTTTTCCATTTTCACTGGAACTAAGAGACTCCACTTGAGGGCTGAGACCCGTGAAGATCGAGTGGCGTGGGTGGAGGCATTGCAGGCAGTGAAAGATATGTTCCCGCGAATGTCCAACAGTGAGCTGATGGCTCCGCTGGACTATCTAACGATTTCAACAGACAAACTGAGACAACGTCTTCTGGAAGAAGGTGTAAGTGAGGCAGCCATCCAAGACAGTGAACAAATTATGAGAAATGAATTTGCAGCGCTACAAAATCACCTTGTGCTGCTGAAGCAGAAGCAGTTGATTCTCACAGACACATTACGACAGCTAGAGACAGAAAAGGTTGATCTGGAGAATACAGTTGTTGATGAGAGCCAAAGACAGTTGAATGATGAGGAGGACTTTTCCAGATTAAAGCATGAAAAGTTTAGTGAAGGAAGCGCAAGCGAATCTGAGGATTATAATGAGAGAAATGATGCTGCAGAGGAAGAAACGGATGACGATGACAATGCCTTTTTTGACACACGAGACTTTCTATCATCCAGTTCTTTTAAAAGTAATGGATCTGATTATAGGGTTTCATCTTTCTCTTCGGGCGATGAAGGGCTTAATTCTATTGAGTCAGAGGAGGACGTAGATCTATCATTAAGATCAGTTGGGACCAGCTATCCCTATGTTAAGCGGCGTAAGAAATTGCCTGACCCTATTGAAAAGGAGAAAGGCGTCAGTCTTTGGTCAATGATTAAGGATAATATCGGGAAGGATCTAACAAAAGTATGTCTTCCTGTTTATTTCAATGAGCCTCTTTCGTCTTTGCAAAAATGTTTTGAAGAAATGGAGTACTCATATCTCTTGGATCGAGCCTATGAATGGGGAAAAAGGGGTAATAGCCTCATGAGAATTCTTAATGTGGCTGCTTTTGCTGTATCGGGCTATGCCTCAACCGAAGGAAGAATTTGCAAGCCATTTAATCCGTTATTGGGGGAAACATATGAGGCTGATTACCCAGATAAAGGCCTTCGTTTTTTCTCAGAGAAGGTTAGTCATCACCCTATGGTAGTTGCATGCCACTGTCAAGGTATAGGGTGGAAATTTTGGGGAGATAGCAACTTAAAGAGCAAATTTTGGGGGCGATCGATTCAGCTTGACCCTGTTGGCATTTTGACTTTGGAATTTGATGATGGGGAAGTTTTTCAGTGGAGCAAGGTGACAACATCAATATACAATCTCATATTGGGGAAGCTGTACTGTGATCACTACGGAACAATGCGTATACAAGGAAACGGAGATTACTCATGTAAACTGAAATTCAAGGAGCAATCTATAATTGATCGAAATCCTCATCAGGTACATGGTATAGTACAAGATAAACATGGAAAAACAGTGGCAACTCTTTTTGGAAAATGGGATGAAAGTATGCATTATGTTTCTGGAGACTTTGCGGTGAAGGGAAAAAGTTATGACTCTTTGTCAGAAGCGCGAATCCTGTGGAAGCGGAGCAAGCCTCCAAAGTTTCCTACTAGATATAATTTCACTCGCTTTGCTATCACATTAAACGAACTTACACCTGGATTGAAGGAAAAGTTGCCGCCAACAGATTCCAGGTTGAGGCCAGACCAAAGGTATTTGGAAAATGGGGAGTATGAAATGGCGAATTCGGAAAAGTTGCGGCTAGAGCAATGGCAACGCCAGGCTCGGAAGATGCAGGAGAGCGGTTGGAAGCCAAGGTGGTTCGCCTTAGACAAAGCAAGCGGCACTTACCGCTATTTGGGAGGGTATTGGGAATCTAGGGAACGGGGAAATTGGGAATCTTGTCCCAACATTTTCGGTCAAATCCCCTCTGACCATCTTTCTGATTGA 2406 0.4522 MHPFCCVSAVSDQSSPVKPSPAPFPSFHMPPPLPPAAPASAIRSDSVPRTNNHNHTYSNHGFGDYGRLSPRELSQPAVDVKINDLVGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIVVNKETEKGSKVIGEESMRTISRNRNSYSSHQQSLHRRKPFGEIHLKVSTIRESRSDDKRFSIFTGTKRLHLRAETREDRVAWVEALQAVKDMFPRMSNSELMAPLDYLTISTDKLRQRLLEEGVSEAAIQDSEQIMRNEFAALQNHLVLLKQKQLILTDTLRQLETEKVDLENTVVDESQRQLNDEEDFSRLKHEKFSEGSASESEDYNERNDAAEEETDDDDNAFFDTRDFLSSSSFKSNGSDYRVSSFSSGDEGLNSIESEEDVDLSLRSVGTSYPYVKRRKKLPDPIEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEEMEYSYLLDRAYEWGKRGNSLMRILNVAAFAVSGYASTEGRICKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMVVACHCQGIGWKFWGDSNLKSKFWGRSIQLDPVGILTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNGDYSCKLKFKEQSIIDRNPHQVHGIVQDKHGKTVATLFGKWDESMHYVSGDFAVKGKSYDSLSEARILWKRSKPPKFPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEYEMANSEKLRLEQWQRQARKMQESGWKPRWFALDKASGTYRYLGGYWESRERGNWESCPNIFGQIPSDHLSD 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00407 801 Coils Coil 733 753 - -
Accr4g00407 801 SMART PH_update 88 221 IPR001849 -
Accr4g00407 801 Gene3D - 511 684 - -
Accr4g00407 801 SUPERFAMILY PH domain-like 90 219 - -
Accr4g00407 801 ProSiteProfiles PH domain profile. 87 219 IPR001849 -
Accr4g00407 801 MobiDBLite consensus disorder prediction 338 353 - -
Accr4g00407 801 FunFam oxysterol-binding protein-related protein 1D isoform X1 511 683 - -
Accr4g00407 801 CDD PH_ORP_plant 90 226 - -
Accr4g00407 801 MobiDBLite consensus disorder prediction 307 337 - -
Accr4g00407 801 FunFam Oxysterol-binding protein-related protein 2A 722 793 - -
Accr4g00407 801 Pfam Pleckstrin homology domain 95 215 - -
Accr4g00407 801 Gene3D - 88 221 IPR011993 -
Accr4g00407 801 MobiDBLite consensus disorder prediction 307 354 - -
Accr4g00407 801 Pfam Oxysterol-binding protein 425 780 IPR000648 GO:0008289
Accr4g00407 801 Coils Coil 289 309 - -
Accr4g00407 801 SUPERFAMILY Oxysterol-binding protein-like 420 797 IPR037239 -
Accr4g00407 801 Gene3D - 722 783 - -
Accr4g00407 801 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 89 779 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00407 Accr-Chr4 3909128 3915173 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00407 K20456 - gmx:100137077 1330.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00407 4 3909128 3915173 Accr4g00407 4 3909128 3915173 ECH