Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00405 ATGCGATCACATCTCTTTCACTTGGTGCGGAACCCTTTGCCCACTCCGTCCTTCTTCTATTTACCAAAAGCAAGATTAGCCACCACCATCAGGCTCAGCAACCTCTCTCCATTAATGGCATCTACAGCTTCGGACATTAACTCAACTAGTTCGCTGGTTTTATGCGGGAAGTCACTGGCCGAGAATGAAATTGCTAAAACAATTAAGAAGAATAATACTTTGAAGCTTCCTGACAGTAGCGAAATTTCGATTATTCTGCGGTCTGAATTGGATAATAAATTTCTCAAAGTTGATTCCTTTGGAATTGATTTATTCATGAACTCGCTTTCTACTCATAAATTTGGACGGTTTCTCATTTGGTCCCCACGGTTGTCTTCAACGCACGATGTGGTCTCACACAACTTCTGTGAGCTTCCCATTGGTGCGGTTTGTGTTGCTGATGTTCAGACCAAGGGACGAGGTCGGTCGAAGAATGTGTGGGAGTCTCCGTTGGGCTGCCTCCTATTTTCTTTCACTCTACAAATGGAGGATGGGCGGGTTGTTCCTTTACTACAGTATGTAGTTTCCCTGGCGATTACGGAGGCAATAAAGGATATCTGCGACAAAATTGGCTTACCCAGTGTTGATGTGAAAATTAAGTGGCCGAATGATCTCTACTTAAATGGCCTTAAAGTTGGAGGCATTTTATGCACCTCAACCTATAGGTCTAAGAAGTTTAATGTTAGTGCAGGTATTGGCATAAATGTCAACAATGAGAAGCCAACAACATGCTTAGATATGGCTCTAAGAGAGTTTTCCATGAAAGCATACCAATTTAAAAGAGAAGATGTTCTGGCAGCCTTCTTCAACAAATTTGAGAATTTTTTTGATCTTTTTATGAATCAAGGATTCCAAACCCTGGAGCCGCTATATTACAAGACATGGTTGCACAGTGGACAGAGAGTTATTGTGCAGGAAAAGAATGAGGACAAAGTGATCGAACATGTGGTGACCATTCAGGGATTAACATCCTCAGGTTACTTGTTGGCCGTTGGCGATGATAATCAAATGTGTGAGCTTCATCCTGATGGCAATAGCTTTGATTTTTTCAAAGGACTGGTTAAAAGGAAACTTGAATGA 1119 0.4164 MRSHLFHLVRNPLPTPSFFYLPKARLATTIRLSNLSPLMASTASDINSTSSLVLCGKSLAENEIAKTIKKNNTLKLPDSSEISIILRSELDNKFLKVDSFGIDLFMNSLSTHKFGRFLIWSPRLSSTHDVVSHNFCELPIGAVCVADVQTKGRGRSKNVWESPLGCLLFSFTLQMEDGRVVPLLQYVVSLAITEAIKDICDKIGLPSVDVKIKWPNDLYLNGLKVGGILCTSTYRSKKFNVSAGIGINVNNEKPTTCLDMALREFSMKAYQFKREDVLAAFFNKFENFFDLFMNQGFQTLEPLYYKTWLHSGQRVIVQEKNEDKVIEHVVTIQGLTSSGYLLAVGDDNQMCELHPDGNSFDFFKGLVKRKLE 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00405 372 ProSiteProfiles Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) catalytic domain profile. 103 293 IPR004143 GO:0036211
Accr4g00405 372 Pfam Biotin/lipoate A/B protein ligase family 121 248 IPR004143 GO:0036211
Accr4g00405 372 SUPERFAMILY Class II aaRS and biotin synthetases 104 308 IPR045864 -
Accr4g00405 372 NCBIfam biotin--[acetyl-CoA-carboxylase] ligase 121 346 IPR004408 GO:0004077|GO:0036211
Accr4g00405 372 Gene3D Bira Bifunctional Protein; Domain 2 106 306 IPR045864 -
Accr4g00405 372 CDD BPL 117 292 IPR004408 GO:0004077|GO:0036211
Accr4g00405 372 PANTHER BIOTIN PROTEIN LIGASE 50 370 - -
Accr4g00405 372 Pfam Biotin protein ligase C terminal domain 310 365 IPR003142 GO:0036211
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00405 Accr-Chr4 3893024 3897643 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00405 K01942 - qsa:O6P43_015225 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00405 4 3893024 3897643 Accr4g00405 4 3893024 3897643 ECH