Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00349 ATGGAGCACAAGGAGAAGTTGCCGGTGAAGTGGCGGTGGTGGTGGCTTCTAGCACTAGTTTTCACGGCGGCTTTTGTCGTCGGGGCCCAGGGAGGCAATGTCACCTACGACGGCAGGTCATTAATCATCAACGGAAAACATGAAATCCTTTTCTCCGGTTCAATTCACTATCCTCGCAGCACTCCTGAGATGTGGCCTTCCCTAATTTCCAAAGCCAAGGAGGGAGGCATAGATGTCATTCAAACTTACGTATTTTGGAACCAGCATGAGCATCTACAAGGCCAGTATGACTTCAGTGGAAGGCTTGATATAGTGAGGTTCATTAAGGAGATCCAATCACAAGGTCTATATGTGACCCTCAGGATTGGACCTTTCATTGAGAGTGAATGGACTTATGGAGGTTTACCCATTTGGTTACATGACGTTCCGGGCATTGTTTTTAGATCAGATAATGAGCCATTCAAGTATCACATGAAAAAGTTCACCACCCAAATAGTAAACTCGATGAAATCCCACAATCTTTTTGCTTCACAAGGAGGACCTATCATACTATCACAGATCGAGAACGAGTATGGTGCGATTGAAGCGGCTTTTGGCGAAGGAGGACCAAGCTATGTTCGTTGGGCTGCACAAATGGCCGTGGGGCTTCAAACTGGTGTGCCCTGGGTCATGTGCAAGCAAGATGATGCTCCTGATCCAGTGATCAACGCATGCAATGGTATGGAATGTGGGAGGACTTTCAAGGGACCTAACTCGCCTAATAAACCTTCCATCTGGACAGAGAACTGGACAAGTTTCTATCAAGCCTTCGGTGACGAACCATACTTGAGATCAGCTGAAAAAATTGCGTATAGTGTTGCTTTGTTCATTGCAAAGAAGGGAAGCTATGTCAACTACTATATGTACCATGGGGGAACAAATTTTGGTAGAACAGCAGCTGCTTTTATGGTTACGGCTTATTATGATGAAGCTCCTCTAGATGAATATGGTTTAATCAGGCAGCCAAAATGGGGTCATCTCAGAGACCTACATGCTGCAATCAAGTCTTGCTCAAAAACTTTGCTTTCAGCTACCCCGACTACTCTCAGCTTGGGCGGGCAACAACAAGCCTATGTTTTCAGAAAGAGCAAAACAGAATGTGCTGCCTTTCTGGAAAATAGAGATCATAAAGAAGTCACTGTCCGATTTCAAAGCATGGCATATAAACTACCTCCACAATCAATTAGCCTTCTCCCAGATTGCAAGAATGTAGTCTTCAACACTGCCCAAGTAAGAGCAAAACACAGTACAAGAACAATGAGCCCTGTAGTACATTTTCAATCAGCCCAACAATGGAAAGAGTATAACGAAGCCATCCCCAACTTCGGTCGTACTATCTCAAGAGCAAACGGGCTAGTCGATCAGATCAGCGAGGCAAAAGATAAATCTGACTATATGTGGTATACTTTAAGGTTGAGTCAATCAAGTTCTCAGTCGCTTCTCAGTGCAACTAGCCATGGACATGTTTTGCATACATTTGTCAATGGAGATTTAGCAGGTTCTGCTCATGGAAGTCACGACAATATATCTTTCACCTTGAAGAGCAATATCAAATTGAGAGAAGGAGTCAATCATATTTCCTTCCTCAGTGCAACAGTTGGATTACCGGATGCTGGAGCATACCTAGAGCGCAAAGTTGCTGGTTTGTGCAATGTCAGAGTTGGTGACACAGATTTCAGTCAGCATTCCTGGGGATATCAGGTTGGGTTAGTAGGAGAATATCTACAAGTCTATACAGAGACAGGATCAAGTAAAGTTCAGTGGAAAAAGCTTGGAAGTTCAAATCCACTGACGTGGTACAAGACCACATTTGATGCACCACCAGGAAATGATCCGGTGGCACTTGATCTTGCTTCAATGGGGAAGGGTCAAGTTTGGGTTAATGGAGAGAGTCTTGGGCGATATTGGGTATCATTCGTCACGCCTAAAGGAAATCCTTCACAGAGATGGTACCATATACCTCGGTCCCTCCTGAAACCTTCTGGAAACCTACTAGTTCTGTTTGAAGAAGAAACTGGGAACCCCCTTAGGATTTCTCTGGACACTGTTACATGGTCCTGA 2100 0.4452 MEHKEKLPVKWRWWWLLALVFTAAFVVGAQGGNVTYDGRSLIINGKHEILFSGSIHYPRSTPEMWPSLISKAKEGGIDVIQTYVFWNQHEHLQGQYDFSGRLDIVRFIKEIQSQGLYVTLRIGPFIESEWTYGGLPIWLHDVPGIVFRSDNEPFKYHMKKFTTQIVNSMKSHNLFASQGGPIILSQIENEYGAIEAAFGEGGPSYVRWAAQMAVGLQTGVPWVMCKQDDAPDPVINACNGMECGRTFKGPNSPNKPSIWTENWTSFYQAFGDEPYLRSAEKIAYSVALFIAKKGSYVNYYMYHGGTNFGRTAAAFMVTAYYDEAPLDEYGLIRQPKWGHLRDLHAAIKSCSKTLLSATPTTLSLGGQQQAYVFRKSKTECAAFLENRDHKEVTVRFQSMAYKLPPQSISLLPDCKNVVFNTAQVRAKHSTRTMSPVVHFQSAQQWKEYNEAIPNFGRTISRANGLVDQISEAKDKSDYMWYTLRLSQSSSQSLLSATSHGHVLHTFVNGDLAGSAHGSHDNISFTLKSNIKLREGVNHISFLSATVGLPDAGAYLERKVAGLCNVRVGDTDFSQHSWGYQVGLVGEYLQVYTETGSSKVQWKKLGSSNPLTWYKTTFDAPPGNDPVALDLASMGKGQVWVNGESLGRYWVSFVTPKGNPSQRWYHIPRSLLKPSGNLLVLFEEETGNPLRISLDTVTWS 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00349 699 Pfam Glycosyl hydrolases family 35 40 346 IPR031330 -
Accr4g00349 699 FunFam Beta-galactosidase 300 426 - -
Accr4g00349 699 Pfam Beta-sandwich domain in beta galactosidase 354 424 IPR041392 -
Accr4g00349 699 PANTHER BETA-GALACTOSIDASE RELATED 23 697 IPR001944 GO:0004553|GO:0005975
Accr4g00349 699 FunFam Beta-galactosidase 30 351 - -
Accr4g00349 699 FunFam Beta-galactosidase 579 699 - -
Accr4g00349 699 PRINTS Glycosyl hydrolase family 35 signature 65 83 IPR001944 GO:0004553|GO:0005975
Accr4g00349 699 PRINTS Glycosyl hydrolase family 35 signature 177 192 IPR001944 GO:0004553|GO:0005975
Accr4g00349 699 PRINTS Glycosyl hydrolase family 35 signature 295 310 IPR001944 GO:0004553|GO:0005975
Accr4g00349 699 PRINTS Glycosyl hydrolase family 35 signature 608 622 IPR001944 GO:0004553|GO:0005975
Accr4g00349 699 PRINTS Glycosyl hydrolase family 35 signature 635 651 IPR001944 GO:0004553|GO:0005975
Accr4g00349 699 PRINTS Glycosyl hydrolase family 35 signature 120 139 IPR001944 GO:0004553|GO:0005975
Accr4g00349 699 PRINTS Glycosyl hydrolase family 35 signature 258 273 IPR001944 GO:0004553|GO:0005975
Accr4g00349 699 PRINTS Glycosyl hydrolase family 35 signature 44 61 IPR001944 GO:0004553|GO:0005975
Accr4g00349 699 PRINTS Glycosyl hydrolase family 35 signature 314 330 IPR001944 GO:0004553|GO:0005975
Accr4g00349 699 SUPERFAMILY Galactose-binding domain-like 408 556 IPR008979 -
Accr4g00349 699 SUPERFAMILY Galactose-binding domain-like 575 697 IPR008979 -
Accr4g00349 699 Gene3D Glycosidases 29 351 - -
Accr4g00349 699 SUPERFAMILY (Trans)glycosidases 31 350 IPR017853 -
Accr4g00349 699 Gene3D - 579 697 - -
Accr4g00349 699 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 179 191 IPR019801 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00349 Accr-Chr4 3420412 3425762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00349 17 697 Glycoside Hydrolase AT5G63800 59.684 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00349 - - gmx:100780980 1038.87