LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr4g00312	ATGGCTATTGCGAAGAATTCCCGAGTTGAAGGGAGGAAGTCGTTGAACTACTTCTCGACAGTCTCTATAGCTGTGCTTCTTGCATTTTGTTTAATTGGTATATGGATAGTAATATCATTCATTGCTCCACTTCAGAATTCAGAGTTGCAGGTATCTGAGACTATTAATGAGGTAAAAAATATAGTAGGTGAAAATGCCTTCACGCAATCTGAAAATAGTTCAGCTGGTATAGTAGATGAATCAATAAAGGCAGATCTCCAGGACAATAAATTTGAGGGTGAAAATCTTTTAAAAAACCAAGAAGAGCAAAAAGCTTCCGGAGACTTGTATGATAATACGGCTGTAGAAAACCGGCTAGAGGATACTATGAGGAAGATCTCTGATGAAAAGAATGATTCAGATGAGGGATCAAGCACTCACGAGAAAGATCTCACCAAAAACTTAAATTCAGAATCTGTAGAAACGGGTCCAGTAGGTTTCCAAACTAATGATGAAAAGAATTTGGACAAAAATGATGGTAACAACACATTAGGAACAGAAAAAAGTACAGGCAATAACAAACTTCAAGATGAGATGGCCAGTGAGACCGTGGAGGAGAAGATTAAGAAAAATATGCGTTCAGAGATAGAAAGAGCTACTGGAGAGAGTATCATGGGAAATCATGATAGTAGTCAAACTTCTGAGGAAGCTTTTGATGCTCATACAGAGTCTGGAATTTTTAATAATGCTACCACAGAAAATGGAACTTGGTCAACTCAAGCTGTAGAGTCACAACATTTGAAGGAAACACAGGCGTCTTTAATTTCTAATGACAGCAACAAATATGAGTGGAAACTTTGTAAAACGACTGCAGGACCAGAATACATTCCTTGCCTTGATAATTGGCAATCTATTAGAAGGCTTCGAAGTATCAGGCACTATGAACACTGGGAGAGGCACTGTCCTGATGAGGCCCCCACCTGTCTTGTTCCTCTAACTGAGGGCTACAGAATCCCAATTAAGTGGCCCAAAAGCAGGGAAATGATATGGTACAAGAATGCACCACACACTAAGCTTGCAGAAGTTAAGGGTCATCAGAATTGGGTCAAAGTTGCTGGGGAGTACCTTAGTTTTCCTGGAGGTGGAACTCAGTTTAAACAAGGTGCTCTACATTACATAGAATTCATTCAGAAATCTCTTCCTAAAATAGCATGGGGGAAAAGAAGTTGTGTTGTATTGGATGTTGGGTGTGGAGTAGCCAGCTTTGGAGGCTACTTGTTTGAAAAAGATGTTCTTACCATGTCATTGGCTCCTAAAGATGTGCATGAGGCCCAAGTACAATTTGCACTTGAAAGAGGAATTCCTGCCATACTAGGTGCTATGGGCACAAAAAGATTACCCTTCCCTGGTTCTGTCTTTGATCTTGTCCACTGTGCACGCTGTAGAGTCCCTTGGCACTTAGAAGGTGGTAGGCTACTGTTGGAGCTTAACCGTGTTTTGCGACCAGGAGGTTGCTTTGTGTGGTCTGCTACCCCAGTGTATCAAAAGAATCCAGAAGACTCTGGGATTTGGAAAGATATGGGTGAAATTACAAAGGCAATGTGCTGGGATCTGGTGGCGATTGGAAGGGACAAAGTGAATGGAGTGGCGGCAGCAATATATAGAAAACCAACTTCCAATGAATGTTATAACTCCAGAGCCAAAAACGAGCCTCCATTGTGCAGTGAGCTTGATGATGCAAACGCAGCTTGGAATGTATCACTAGAGACTTGTATGCACAAAATTCCTGTTGGTGCATCAGAGCGTGGATCAGTCTGGCCTGTACGTTGGCCGGTGAGGTTGGAGAAACCACCTTATTGGTTGAACTCTCAGGCAGGTGTTTATGGAAGACCTGCTCCTGTAGAATTCACTGCTGACTCTAGGCATTGGAAAAACGTTCTTTCCCACTCATATATGGATGGAATGGGCATCAATTGGTCTTCAGTAAGAAATGTCATGGACATGAGAGCTGTTTATGGAGGGTTTGCTGCTGCTCTGAAAAGCTTTAAGGTGTGGGTAATGAATGTTGTTCCGATCGACTCTCCAGATACACTGGCTATCATCTATGAGCGTGGCTTATTTGGAATTTATCACGATTGGTGTGAGTCATTCAATACCTACCCTAGATCCTATGATCTTCTCCATGCTGATTACCTATTCTCTAAGACTAAAGAGAGATGCAACATAGTAGCGGTGATTGCAGAAGTTGATCGGATCATGAGACCTGAAGGTTACTTGATCGTAAGGGACAATGTCGAAAGTACAGATGAGATTGAGAATATCGCTAAATCTCTACACTGGGATATACGATTTAAGTATTCAAATGTCAATGAGGGAATACTCTGTATTCAGAAGACATTCTGGCGTCCAACCCAAACAGAAACCATTGTGTCAGCCATTGCTTGA	2424	0.4183	MAIAKNSRVEGRKSLNYFSTVSIAVLLAFCLIGIWIVISFIAPLQNSELQVSETINEVKNIVGENAFTQSENSSAGIVDESIKADLQDNKFEGENLLKNQEEQKASGDLYDNTAVENRLEDTMRKISDEKNDSDEGSSTHEKDLTKNLNSESVETGPVGFQTNDEKNLDKNDGNNTLGTEKSTGNNKLQDEMASETVEEKIKKNMRSEIERATGESIMGNHDSSQTSEEAFDAHTESGIFNNATTENGTWSTQAVESQHLKETQASLISNDSNKYEWKLCKTTAGPEYIPCLDNWQSIRRLRSIRHYEHWERHCPDEAPTCLVPLTEGYRIPIKWPKSREMIWYKNAPHTKLAEVKGHQNWVKVAGEYLSFPGGGTQFKQGALHYIEFIQKSLPKIAWGKRSCVVLDVGCGVASFGGYLFEKDVLTMSLAPKDVHEAQVQFALERGIPAILGAMGTKRLPFPGSVFDLVHCARCRVPWHLEGGRLLLELNRVLRPGGCFVWSATPVYQKNPEDSGIWKDMGEITKAMCWDLVAIGRDKVNGVAAAIYRKPTSNECYNSRAKNEPPLCSELDDANAAWNVSLETCMHKIPVGASERGSVWPVRWPVRLEKPPYWLNSQAGVYGRPAPVEFTADSRHWKNVLSHSYMDGMGINWSSVRNVMDMRAVYGGFAAALKSFKVWVMNVVPIDSPDTLAIIYERGLFGIYHDWCESFNTYPRSYDLLHADYLFSKTKERCNIVAVIAEVDRIMRPEGYLIVRDNVESTDEIENIAKSLHWDIRFKYSNVNEGILCIQKTFWRPTQTETIVSAIA	807

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr4g00312	807	Coils	Coil	83	103	-	-
	Accr4g00312	807	PANTHER	SAM-DEPENDENT METHYLTRANSFERASE	23	795	IPR004159	GO:0008168
	Accr4g00312	807	MobiDBLite	consensus disorder prediction	172	191	-	-
	Accr4g00312	807	MobiDBLite	consensus disorder prediction	123	195	-	-
	Accr4g00312	807	FunFam	Probable methyltransferase PMT25	377	542	-	-
	Accr4g00312	807	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	652	771	IPR029063	-
	Accr4g00312	807	Coils	Coil	112	132	-	-
	Accr4g00312	807	MobiDBLite	consensus disorder prediction	123	148	-	-
	Accr4g00312	807	Gene3D	Vaccinia Virus protein VP39	358	533	IPR029063	-
	Accr4g00312	807	MobiDBLite	consensus disorder prediction	149	164	-	-
	Accr4g00312	807	Pfam	Putative S-adenosyl-L-methionine-dependent methyltransferase	287	791	IPR004159	GO:0008168
	Accr4g00312	807	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	311	558	IPR029063	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr4g00312	Accr-Chr4	3038291	3042695	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr4g00312	-		-	gmx:100793395	1154.04