Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00297 ATGGCTCTAGAGAACTGTTTACGAGTGAGCACAGTGGGTATGGCCAGACCTCAATGCATTCATCCATTTTCTTCGAGGGCAAAGATAGTTGTCCCCAATTTCAAAGGATTCAAATCAACACTATCAAACCCCTCTCTTAAATCAACCACCAGAAATTTCCGAAGATCCCGTTTTATTTGCAATGCTCGCGAAGCTGTTGACGAAGTTCGAGTAGTGACAGATTCAACCTGGAATAACCTGGTGATAGCAAGCGAAACCCCAGTGCTGGTGGAGTTCTGGGCACCATGGTGTGGACCATGCAGGATGATAGCCCCTGTGATCGATGAATTGGCGAAAGAGTATGCTGGCAAAATTGCTTGCTTCAAGCTCAACACTGATGACAGTCCAAACATACCCACACAATATGGAATCAGGAGCATACCGACAGTTCTCTTCTTCAAAAATGGCGAGAAGAAAGAGAGCGTAATTGGTGCGGTCCCCAAGTCTACCCTGTCCGCGACGGTGGAGAAATATGTGGAAATCTGA 525 0.4648 MALENCLRVSTVGMARPQCIHPFSSRAKIVVPNFKGFKSTLSNPSLKSTTRNFRRSRFICNAREAVDEVRVVTDSTWNNLVIASETPVLVEFWAPWCGPCRMIAPVIDELAKEYAGKIACFKLNTDDSPNIPTQYGIRSIPTVLFFKNGEKKESVIGAVPKSTLSATVEKYVEI 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00297 174 ProSiteProfiles Thioredoxin domain profile. 25 173 IPR013766 -
Accr4g00297 174 FunFam Thioredoxin 64 172 - -
Accr4g00297 174 NCBIfam thioredoxin 73 171 IPR005746 GO:0015035
Accr4g00297 174 ProSitePatterns Thioredoxin family active site. 89 107 IPR017937 -
Accr4g00297 174 CDD TRX_family 81 169 - -
Accr4g00297 174 PANTHER GEO12009P1 61 172 - -
Accr4g00297 174 Gene3D Glutaredoxin 69 173 - -
Accr4g00297 174 PRINTS Thioredoxin family signature 88 96 - -
Accr4g00297 174 PRINTS Thioredoxin family signature 96 105 - -
Accr4g00297 174 PRINTS Thioredoxin family signature 136 147 - -
Accr4g00297 174 SUPERFAMILY Thioredoxin-like 57 172 IPR036249 -
Accr4g00297 174 Pfam Thioredoxin 69 169 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00297 Accr-Chr4 2894292 2894975 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00297 K03671 - gmx:100500292 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00297 4 2894292 2894975 Accr4g00297 4 2894292 2894975 ECH