Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00226 ATGGGTGATTGGCAATCACTTGTCCAATCCATTTTTCTTGGTCTCATTTTCTCTTACCTCCTTGCCAAGCTCATATCCATCCTCGTATCATTCAAGGACGATAATCTGACTGTAACTCGCCGCAGTATTAGTAGCACCGACCATGTAAGTGATCGGAGCAAGGTAGAACCCGACGTCAACCCTCTTGGGCGCAGGCCTGATGCCGATGAAGGCGAGCATCGCGAGAATGAATCGATATTGGCGGAGCAGGGCAGCGTGAGAAATGAAAGTGTGGACGGTGATGACGACGATGACGACGATTGGGAGGGAGTGGAAAGCACAGAATTGGACGAGGCCTTCAGTGCCGCTACGGCTTTTGTGGCTGCTACCGCTGCCGATCGGCTGTCACAGAAGGTGTCCAGTGATGTGCAGCTCCAGCTATATGGGCTGTACAAAATTGCAACCGAAGGGCCTTGTAGCACGGCACAGCCTTCGGCACTGAAAATGACGGCCCGAGCCAAATGGCAAGCATGGCAGAAACTGGGTGCCATGCCTCCTGAAGATGCAATGCAGAAGTATATTGATATTGTGACGGAGCTTTACCCTACCTGGTTAGATGGCTCGGCTTTGAGGAGCAAAAGTGGAGATGATGTTGGCCCAAATTCAGGGTCGTCAGAATCTAAGGGACCAATGGGACCTGTGTTCAGCACTTTTGTGTATGAAGAAGAAGCTGGCAGTGATTTAAAAATGGATGCAATTCATGGGTATGCCAGAGAAGGAGACTCAACTAATCTGCTCAAGTGTATTGAAAATGGTGTTTCGGTGAATCTGAAGGACAGTGAGGGTCAGACACCATTACATTGGGCTGTGGATCGTGGGCACCTTGAGGTCACAGAACTGCTAGTTAGTAGGAATGCTGATGTAAATGCCAAGGATGATGATGGGCAAACTCCATTGCATTATGCTGTTGTGTGCGAGAGAGAGGCTATAGCTGAGTATTTAGTGAAGCATAATGCGGACCCAGATTTGAAGGATAATGATGGCAGTTCGTCACGTGACCTCTGCAAGCCAAACTGGCGTTGCATGCAACCTGTGGGGAATTAA 1083 0.4931 MGDWQSLVQSIFLGLIFSYLLAKLISILVSFKDDNLTVTRRSISSTDHVSDRSKVEPDVNPLGRRPDADEGEHRENESILAEQGSVRNESVDGDDDDDDDWEGVESTELDEAFSAATAFVAATAADRLSQKVSSDVQLQLYGLYKIATEGPCSTAQPSALKMTARAKWQAWQKLGAMPPEDAMQKYIDIVTELYPTWLDGSALRSKSGDDVGPNSGSSESKGPMGPVFSTFVYEEEAGSDLKMDAIHGYAREGDSTNLLKCIENGVSVNLKDSEGQTPLHWAVDRGHLEVTELLVSRNADVNAKDDDGQTPLHYAVVCEREAIAEYLVKHNADPDLKDNDGSSSRDLCKPNWRCMQPVGN 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00226 360 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 109 199 IPR000582 GO:0000062
Accr4g00226 360 Gene3D - 103 215 IPR014352 -
Accr4g00226 360 SUPERFAMILY Acyl-CoA binding protein 108 198 IPR035984 GO:0000062
Accr4g00226 360 Pfam Acyl CoA binding protein 110 190 IPR000582 GO:0000062
Accr4g00226 360 ProSiteProfiles Ankyrin repeat region circular profile. 307 339 - -
Accr4g00226 360 ProSiteProfiles Ankyrin repeat profile. 274 306 IPR002110 GO:0005515
Accr4g00226 360 PRINTS Acyl-coA-binding protein signature 132 150 IPR000582 GO:0000062
Accr4g00226 360 PRINTS Acyl-coA-binding protein signature 176 193 IPR000582 GO:0000062
Accr4g00226 360 PRINTS Acyl-coA-binding protein signature 155 170 IPR000582 GO:0000062
Accr4g00226 360 ProSiteProfiles Ankyrin repeat region circular profile. 274 306 - -
Accr4g00226 360 Gene3D - 233 352 IPR036770 -
Accr4g00226 360 MobiDBLite consensus disorder prediction 208 224 - -
Accr4g00226 360 PRINTS Ankyrin repeat signature 323 337 IPR002110 GO:0005515
Accr4g00226 360 PRINTS Ankyrin repeat signature 275 290 IPR002110 GO:0005515
Accr4g00226 360 SMART ANK_2a 241 270 IPR002110 GO:0005515
Accr4g00226 360 SMART ANK_2a 274 303 IPR002110 GO:0005515
Accr4g00226 360 SMART ANK_2a 307 336 IPR002110 GO:0005515
Accr4g00226 360 ProSiteProfiles Ankyrin repeat profile. 307 339 IPR002110 GO:0005515
Accr4g00226 360 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6 3 352 - -
Accr4g00226 360 MobiDBLite consensus disorder prediction 47 102 - -
Accr4g00226 360 Pfam Ankyrin repeats (3 copies) 247 338 IPR002110 GO:0005515
Accr4g00226 360 SUPERFAMILY Ankyrin repeat 243 348 IPR036770 -
Accr4g00226 360 MobiDBLite consensus disorder prediction 205 225 - -
Accr4g00226 360 MobiDBLite consensus disorder prediction 47 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00226 Accr-Chr4 2270521 2274229 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00226 1 356 Acyl Lipid Metabolism Gene Families AT5G53470 63.025 2.65e-146 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00226 - - psat:127081845 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00226 4 2270521 2274229 Accr4g00226 4 2270521 2274229 ECH