Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00179 ATGTCGCCAGGTCCCGTTGTTGAGGCCGCTGCCGATGAGCAACTTCCATCGGCCGAGGAGACTCAGAACAAGAACCATGAACCCAAGGAGGACGATGCTCCTGTCGTTGAGGATGTGAAGGACGACGACAAAGATGAAGACGATGATGAGGACGACGACGACGACGAGGATGACAAGGAAGATGGTGCTCAAGGTGCTACAGAGGGGTCGAAGCAAAGCAGAAGTGAGAAGAAGAGTCGTAAAGCCATGTTGAAGCTGGGACTGAAGCCTGTTACTGGTGTTAGCAGGGTCACAATCAAGAGAACGAAAAATGTTCTCTTTTTCATCTCAAAGCCTGATGTGTTCAAGAGTCCAAACTCAGAGACCTATGTAATATTTGGGGAAGCCAAAATAGAGGACTTGAGCTCACAGTTGCAGACACAAGCTGCTCAGCAGTTCAGGATGCCAGATATGGGATCAGTGATGGCAAAACCAGATGCTGCTGCGGCAGCAGCTGCGGGAGCACCGCCTGATGAGGAAGAAGAGGAGGTTGATGAAACAGGAGTGGAGCCTCGTGACATCGAATTGGTGATGACGCAGGCCGGAGTGTCCAGAAGCAAGGCCGTCAAGGCTCTCAAGACTCACAGCGGAGACATTGTTGGTGCTATCATGGAACTCACTACTTGA 666 0.512 MSPGPVVEAAADEQLPSAEETQNKNHEPKEDDAPVVEDVKDDDKDEDDDEDDDDDEDDKEDGAQGATEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNVLFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGSVMAKPDAAAAAAAGAPPDEEEEEVDETGVEPRDIELVMTQAGVSRSKAVKALKTHSGDIVGAIMELTT 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00179 221 MobiDBLite consensus disorder prediction 160 185 - -
Accr4g00179 221 ProSiteProfiles NAC A/B domain profile. 73 138 IPR002715 -
Accr4g00179 221 Pfam NAC domain 76 131 IPR002715 -
Accr4g00179 221 Gene3D - 82 135 IPR038187 -
Accr4g00179 221 FunFam Nascent polypeptide-associated complex (NAC), alpha subunit 83 135 - -
Accr4g00179 221 CDD NAC_NACA 87 134 - -
Accr4g00179 221 Gene3D - 182 219 - -
Accr4g00179 221 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 17 220 IPR016641 GO:0005854
Accr4g00179 221 SMART NAC_2 76 132 IPR002715 -
Accr4g00179 221 MobiDBLite consensus disorder prediction 19 35 - -
Accr4g00179 221 Pfam HYPK UBA domain 181 220 IPR044034 -
Accr4g00179 221 CDD UBA_NAC_euk 184 220 - -
Accr4g00179 221 MobiDBLite consensus disorder prediction 36 62 - -
Accr4g00179 221 MobiDBLite consensus disorder prediction 1 82 - -
Accr4g00179 221 FunFam Putative nascent polypeptide-associated complex subunit alpha 182 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00179 Accr-Chr4 1793715 1795560 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00179 K03626 - tcc:18605871 265.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00179 4 1793715 1795560 Accr4g00179 4 1793715 1795560 ECH