Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Accr4g00175 | ATGGGTGAAGAAGCTAAACAGGAAAAACCTAAGGCAGAGGACAAGAAAGAAGAGAAAACAGAGGAAAAACCAGGGGCAGAGAAGAAAGAAGAGGAAAAGCCACCGGAGGAGGAGAAAGAAAAGAAAGCAGAAGAAAAACCAGCAGAGGAGAAGAAGGAAGAGCCAAAACCACCATCACCATGCGTGATTTCTGTTGACTTACATTGTGTGGGATGTGCCAAGAAAATTGAGAGATGTATTATGAAAATGCGAGGAGTTGAAGGGGTGGTCATTGATATGGCTAAAAATGAAATAACCATAAAAGGGATAGTGGAACCACAAGCAATCTGCGATAAGATTACCAAGAGAACAAGGAGAAGAGCCAAAGTCATTTCTCCATCGCCCGCAGCAGAAGGAGAACCTATCCCAGAAGTTGTTACTTCTCAGGTTAGTGGACCAGTAACTGTGGAACTTAATGTGAACATGCACTGTGAGGCGTGTGCCGAGCAACTCAAGAAGAAAATTCTCAAAATGAGAGGAGTACAAACTGCAGAGACAGAACTGAGCACAGGGAAGGTTACTGTGACAGGAACAATGGATGCAAACAAGCTAGTGGACTATGTGTACAGACGCACCAAAAAGCAAGCGAAGATAGTTCCACAACCAGAGCCTGAACCAGAGAAGAAGGAAGAACCTAAAGAAGCGGAGAAAGCAGCAGAGAAGGCAAAAGCTGAAGAGAAGAAGGAAGAGAACAAAGAGAAGAAAGAGGAAGAGAAACCTGCAGCAGAGAAGCCCAAGAAGGAAGAAGAAGGTAACAAAGAAGTAGGTGAAGATAAGAGTGAGAATAAAGAAGAAAAAAGAGCTGAAGAAAGCAAGGAAGAGGCCAAGAAAGAAGGAGGAGATCAGAATAATAATAATAATGGGATGGTGGTGATTGATGATGAAGGAATAAAGAGGATGATGTATTATTATCAGCAGCCACTGTATATGATTGAACGAATCCCTCCTCCTCAGCTCTTCAGCGATGAAAACCCCAATGCATGCTGCATTTCATAA | 1035 | 0.429 | MGEEAKQEKPKAEDKKEEKTEEKPGAEKKEEEKPPEEEKEKKAEEKPAEEKKEEPKPPSPCVISVDLHCVGCAKKIERCIMKMRGVEGVVIDMAKNEITIKGIVEPQAICDKITKRTRRRAKVISPSPAAEGEPIPEVVTSQVSGPVTVELNVNMHCEACAEQLKKKILKMRGVQTAETELSTGKVTVTGTMDANKLVDYVYRRTKKQAKIVPQPEPEPEKKEEPKEAEKAAEKAKAEEKKEENKEKKEEEKPAAEKPKKEEEGNKEVGEDKSENKEEKRAEESKEEAKKEGGDQNNNNNGMVVIDDEGIKRMMYYYQQPLYMIERIPPPQLFSDENPNACCIS | 344 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Accr4g00175 | 344 | CDD | HMA | 150 | 190 | IPR006121 | GO:0046872 | |
| Accr4g00175 | 344 | ProSiteProfiles | Heavy-metal-associated domain profile. | 58 | 121 | IPR006121 | GO:0046872 | |
| Accr4g00175 | 344 | Pfam | Heavy-metal-associated domain | 63 | 112 | IPR006121 | GO:0046872 | |
| Accr4g00175 | 344 | Pfam | Heavy-metal-associated domain | 152 | 198 | IPR006121 | GO:0046872 | |
| Accr4g00175 | 344 | CDD | HMA | 62 | 115 | IPR006121 | GO:0046872 | |
| Accr4g00175 | 344 | Coils | Coil | 227 | 252 | - | - | |
| Accr4g00175 | 344 | Coils | Coil | 271 | 291 | - | - | |
| Accr4g00175 | 344 | Gene3D | - | 60 | 121 | - | - | |
| Accr4g00175 | 344 | Gene3D | - | 145 | 211 | - | - | |
| Accr4g00175 | 344 | ProSiteProfiles | Heavy-metal-associated domain profile. | 146 | 210 | IPR006121 | GO:0046872 | |
| Accr4g00175 | 344 | SUPERFAMILY | HMA, heavy metal-associated domain | 64 | 116 | IPR036163 | GO:0046872 | |
| Accr4g00175 | 344 | MobiDBLite | consensus disorder prediction | 209 | 302 | - | - | |
| Accr4g00175 | 344 | MobiDBLite | consensus disorder prediction | 1 | 60 | - | - | |
| Accr4g00175 | 344 | MobiDBLite | consensus disorder prediction | 1 | 57 | - | - | |
| Accr4g00175 | 344 | Coils | Coil | 2 | 22 | - | - | |
| Accr4g00175 | 344 | SUPERFAMILY | HMA, heavy metal-associated domain | 143 | 207 | IPR036163 | GO:0046872 | |
| Accr4g00175 | 344 | PANTHER | HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 9 | 1 | 344 | IPR044258 | GO:0046872 | |
| Accr4g00175 | 344 | MobiDBLite | consensus disorder prediction | 209 | 293 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Accr4g00175 | Accr-Chr4 | 1778808 | 1780645 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Accr4g00175 | - | - | gmx:100779431 | 351.288 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Accr3g01237 | 3 | 13957469 | 13959587 | Accr4g00175 | 4 | 1778808 | 1780645 | CCT | |
| Accr4g00175 | 4 | 1778808 | 1780645 | Accr4g00175 | 4 | 1778808 | 1780645 | ECH |