Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00159 ATGGCATTCTGGAAGCTGCCCACTTTGGTCCTCCTCCTCTTCACATTCTCAACTTGTTCAAACGGCATCACATTCACCATCACCAATAACTGCACCAGCACCATATGGCCTGGCACCATGGCGGGTTCAGGGACGGCGCAGCTTTCCCGGACGGGGTTCAGGCTGGAGGCAGGGCGAAGTGTGAAGTTGACGACAAGCGGGGCGAAATGGTCCGGGAGGATATGGGGAAGGACAGGGTGCAAGTTTGATGGGAATGGGGAGGGCAAGTGCGAGACAGGTGATTGTGGGGGGAAGCTCGAGTGTGAAGGGAATGGAGCAGCTCCTCCGGTGTCCTTGTTTGAGATAACACTTGGCGGCGGCACTGGCCAAGACTTCTACGATGTCAGCCTCGTCGACGGCTACAACCTCCCAATGCTTGTCGTCCCGGCAGACGTCTATGGCACCTCCGCCTGTAATTCCACCGGTTGTATTTCTAATCTCAACACAGGTTGCCCTAAAGAACTTCAAGTGCAGGGAAGTGGAGGCGTAATTGGGTGCAGAAGCGCTTGCGAGGCATTTGATACGGACCAGTACTGCTGCAGAGGACAACATGCGGGCCCAGCCACATGCCCTCCCTCACAATACTCGACCATGTTCAAGAAGGCGTGTCCCAGAGCTTACAGCTACGCTTATGATGATGCCACCAGCACCTTCACTTGCAAAGCCTACGGCTATCACATCATCTTCTGCCCCTCCGCCTCCTCCAGGAAACCAAGAAATAAACGCAACGGCAAGACTCAGCAAGTTGGTTCCTCCAATGCTTTCTCCCCCTATTCATGCCCAACCTCCCTCTATATTGCCGCTCTTGCTTTTTGGACTTCTATGGCAACATGGTCTTTTACATGA 885 0.5412 MAFWKLPTLVLLLFTFSTCSNGITFTITNNCTSTIWPGTMAGSGTAQLSRTGFRLEAGRSVKLTTSGAKWSGRIWGRTGCKFDGNGEGKCETGDCGGKLECEGNGAAPPVSLFEITLGGGTGQDFYDVSLVDGYNLPMLVVPADVYGTSACNSTGCISNLNTGCPKELQVQGSGGVIGCRSACEAFDTDQYCCRGQHAGPATCPPSQYSTMFKKACPRAYSYAYDDATSTFTCKAYGYHIIFCPSASSRKPRNKRNGKTQQVGSSNAFSPYSCPTSLYIAALAFWTSMATWSFT 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00159 294 ProSitePatterns Thaumatin family signature. 86 101 IPR017949 -
Accr4g00159 294 PANTHER OS03G0233200 PROTEIN 11 244 IPR001938 -
Accr4g00159 294 SUPERFAMILY Osmotin, thaumatin-like protein 24 245 IPR037176 -
Accr4g00159 294 SMART tha2 25 244 IPR001938 -
Accr4g00159 294 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Accr4g00159 294 PRINTS Pathogenesis-related protein signature 234 243 IPR001938 -
Accr4g00159 294 PRINTS Pathogenesis-related protein signature 24 36 IPR001938 -
Accr4g00159 294 PRINTS Pathogenesis-related protein signature 86 115 IPR001938 -
Accr4g00159 294 PRINTS Pathogenesis-related protein signature 124 140 IPR001938 -
Accr4g00159 294 ProSiteProfiles Thaumatin family profile. 24 244 IPR001938 -
Accr4g00159 294 PIRSF PR5 1 287 IPR001938 -
Accr4g00159 294 Gene3D Thaumatin 23 244 IPR037176 -
Accr4g00159 294 FunFam THAUMATIN-LIKE PROTEIN 1 23 244 - -
Accr4g00159 294 CDD TLP-PA 24 243 - -
Accr4g00159 294 Pfam Thaumatin family 29 244 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00159 Accr-Chr4 1662532 1663629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00159 8 264 Receptor kinase-like Gene Family AT5G38280 43.985 3.83e-68 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00159 - - vum:124820392 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00159 4 1662532 1663629 Accr4g00159 4 1662532 1663629 ECH