Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01994 ATGTTTGGGGTCATAAGGCGAAGAGTTGCTTCTGGCAGCTCGTATCCTCCGTTTCAGGGTATCTCGTTTCAGAAAGTTCGGCCAAACCAATTACTGCCAAGTCGATTTTCTTCCATTTTGGAGAAAGAGATCGTATATCTTTCTGGAGGATGGCAGAGTGTTCGCAATGTCTGTCACTCAAGTTCAAGTGGGTGCTGGAGCAATTTAAAGCCCATGAGAGACTTGTATTATGAAGAGATTACAAGGCAAACATGGAGGCGCTCCTTTTCTTCAGACAATGGAGATCTAGTTGATGTTGTGGTCCCTCCATTAGCTGAATCTATCGCTGATGGCACTCTTGCGACCTTTTTGAAAAAACCAGGTGATAGTGTTAAAGTTGATGAACCGATAGCACAAATTGAGACAGATAAGGTGACAATTGATGTTACCAGTCCTGAGTCGGGTGTGATTCAGAAGCTTCTAGCCAATGAAGGGGATACTGTTGAACCCGGAAATAAGATAGCAATCATTTCAAGGTCTGCTGAAGCCACAACTCATGTTGCCCCATCTGAAAGCGTATCAGAGAAACCTGCTCCTCAGCCAACCCAGAAGATCAAAGAGGAAACGAAAGCATCCAAAGTTGAAGCTGCCCCTACCACAGAGAAGCCTAAAGCACCCTCTCCTCCACGGCACTCTCCCACAGAGCCACAGCTTCCCCCTAAGGAAAGAGAGAGACGAGTTCCTATGACAAGACTCCGAAAGCGGGTTGCTACTCGATTGAAAGATTCCCAAAACACCTTTGCATTGCTGACAACATTCAATGACGTTGATATGACTAACTTGATGAAGCTCCGTGCTGATTATAAGGATGTTTTTGTTGAAAAGCATGGAGTCAAATTGGGACTAATGTCTGGGTTTGTTAAAGCTGCTGTGAATGCACTCCAGCATCAGCCAATAGTGAATGCTGTAATTGATGGTGATGATATAATATACAGAGATTATATAGATATCAGCGTAGCTGTTGGCACTTCAAAGGGCCTTGTTGTACCAGTTATTCGTAATGCTGATAAGTTGAACTTTGCGGAAATAGAAAAGGAGATAAATAATTTTGCGAAAAAGGCAAATAATGGAACTTTATCAATTGATGAGATGGCTGGAGGCACTCTTACAATATCAAATGGCGGTGTTTATGGGAGCCTTTTGAGTACCCCCATAATCAATCCCCCTCAGTCCGCAATTTTGGGTATGCACTCTATAGTGACCCGTCCAATGGTGGTTGGAGGTCAAGTAGTCCCAAGGCCGATGATGTATGTTGCTCTAACGTATGATCATAGGTTGATTGATGGAAGAGAGGCAGTGTTCTTTTTGCGTCGAATCAAAGATGTTATTGAGGATCCTCGGAGGCTTCTGCTCGACATATGA 1401 0.4383 MFGVIRRRVASGSSYPPFQGISFQKVRPNQLLPSRFSSILEKEIVYLSGGWQSVRNVCHSSSSGCWSNLKPMRDLYYEEITRQTWRRSFSSDNGDLVDVVVPPLAESIADGTLATFLKKPGDSVKVDEPIAQIETDKVTIDVTSPESGVIQKLLANEGDTVEPGNKIAIISRSAEATTHVAPSESVSEKPAPQPTQKIKEETKASKVEAAPTTEKPKAPSPPRHSPTEPQLPPKERERRVPMTRLRKRVATRLKDSQNTFALLTTFNDVDMTNLMKLRADYKDVFVEKHGVKLGLMSGFVKAAVNALQHQPIVNAVIDGDDIIYRDYIDISVAVGTSKGLVVPVIRNADKLNFAEIEKEINNFAKKANNGTLSIDEMAGGTLTISNGGVYGSLLSTPIINPPQSAILGMHSIVTRPMVVGGQVVPRPMMYVALTYDHRLIDGREAVFFLRRIKDVIEDPRRLLLDI 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01994 466 CDD lipoyl_domain 97 170 - -
Accr3g01994 466 MobiDBLite consensus disorder prediction 194 210 - -
Accr3g01994 466 ProSiteProfiles Biotinyl/lipoyl domain profile. 96 171 IPR000089 -
Accr3g01994 466 NCBIfam dihydrolipoyllysine-residue succinyltransferase 201 465 IPR006255 GO:0004149|GO:0006099|GO:0045252
Accr3g01994 466 Gene3D - 223 462 IPR023213 -
Accr3g01994 466 SUPERFAMILY Single hybrid motif 96 183 IPR011053 -
Accr3g01994 466 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED 70 465 - -
Accr3g01994 466 MobiDBLite consensus disorder prediction 229 243 - -
Accr3g01994 466 SUPERFAMILY CoA-dependent acyltransferases 236 465 - -
Accr3g01994 466 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 121 150 IPR003016 -
Accr3g01994 466 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 236 464 IPR001078 GO:0016746
Accr3g01994 466 MobiDBLite consensus disorder prediction 174 243 - -
Accr3g01994 466 Gene3D - 96 173 - -
Accr3g01994 466 MobiDBLite consensus disorder prediction 176 192 - -
Accr3g01994 466 FunFam Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial 229 464 - -
Accr3g01994 466 Pfam Biotin-requiring enzyme 98 170 IPR000089 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01994 Accr-Chr3 29826289 29847404 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01994 87 464 Acyl Lipid Metabolism Gene Families AT1G54220 29.186 1.96e-39 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01994 K00658 - gmx:100799149 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01994 3 29826289 29847404 Accr3g01994 3 29826289 29847404 ECH