Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01876 ATGGCGCCTGTGAGAGCGACAGGCGCTATTGTCGGCGTGGCTGCCATTTTCGTCTCGGTAGCTTTCTCCTTTTACATATGCGATCGTCGTTCTAAATCTTCCTCCCTGAAGACACGCTCAACTTCATCAAAGAAGAAATCGAGGATGGGGCTCGTTGATGCCATTGGGAACACGCCTTTAATTCGAATTAACAGCCTTTCTGATGCCACGGGTTGTGAGATTTTTGGGAAGTGCGAGTTTTTGAACCCTGGAGGGAGTGTGAAAGACCGAGTTGCAGTGAAAATCATTGAAGAGGCTTTATCCTCTGGCCAACTACGCCCAGGTGGAATAGTTACTGAAGGGAGTGTTGGAAGCACTGCCATTAGCCTTGCCACTGTCGCGCCTGCCTACGGATGCAAATGCCATTTAGTTATCCCAGATGATGTTGCAATTGAAAAGGCTCAGACAATTGAAGCTCTAGGAGCTACTGTTGAAAAAGTTAGGCCAGTGTCAATCACTCACAAGGATCATTTTGTAAATGTTGCGAGAAGACGGGCATCAGAAGCAAATGAGTTGATGTTAGAACAAAGAAATAAATTGCAATTGAATGGCGGAAACATTAAACCGATCAATGTTTACAGATCTGATGAAGATAGACACAGTTCAGCTCTTTCTACGGATTGTCAAGGTGGCTTCTTTGCTGATCAGTTTGAGAATTTGGCAAACTTCAGGGCTCACTTTGATGGTACAGGACCTGAGATTTGGGAACAAACAAATGGAAAGTTGGATGCATTTGTTGCAGGAGCCGGCACTGGAGGCACTTTGGCTGGTGTTTCTAGGTTTCTTCAGGAGAAGAATACAAAAATCAAGTGCTTCCTCATAGATCCTCCTGGTTCTGGTTTGTTCTACAAGGTAACAAGGGGGGTGATGTACACCAAACAGGAAGCAGAAGGAAAAAGACTCAAGAATCCATTTGATACCATAACAGAAGGTATTGGATGTAATAGGATTACAAAGAATTTTATGATGGCAAAAGTTGATGGCGCTTTTCAAGCCACAGATATGGAGGCTGTTGAAATGTCTAGGTTTCTTCTGAAGAACGATGGACTATTTCTTGGGAGTTCTTCAGCAATGAATTGCGTTGGAGCAGTTAGAGTGGCACAGTCGCTGGGACCTGGTCATACAATTGTAACCATTCTCTGTGACAGTGGAATGAGACATCTGAGTAGGTTCCACAATCCTCAATACCTGTCTCAGCTTGGCTTGACTCCTAAAGCAACTGGGTTAGAGTTTCTAGGTATCAAATGA 1287 0.4421 MAPVRATGAIVGVAAIFVSVAFSFYICDRRSKSSSLKTRSTSSKKKSRMGLVDAIGNTPLIRINSLSDATGCEIFGKCEFLNPGGSVKDRVAVKIIEEALSSGQLRPGGIVTEGSVGSTAISLATVAPAYGCKCHLVIPDDVAIEKAQTIEALGATVEKVRPVSITHKDHFVNVARRRASEANELMLEQRNKLQLNGGNIKPINVYRSDEDRHSSALSTDCQGGFFADQFENLANFRAHFDGTGPEIWEQTNGKLDAFVAGAGTGGTLAGVSRFLQEKNTKIKCFLIDPPGSGLFYKVTRGVMYTKQEAEGKRLKNPFDTITEGIGCNRITKNFMMAKVDGAFQATDMEAVEMSRFLLKNDGLFLGSSSAMNCVGAVRVAQSLGPGHTIVTILCDSGMRHLSRFHNPQYLSQLGLTPKATGLEFLGIK 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01876 428 CDD CBS_like 56 402 - -
Accr3g01876 428 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 48 407 IPR036052 -
Accr3g01876 428 FunFam Cysteine synthase 237 401 - -
Accr3g01876 428 Gene3D - 237 401 IPR036052 -
Accr3g01876 428 Gene3D - 55 84 IPR036052 -
Accr3g01876 428 FunFam Cysteine synthase, putative 55 84 - -
Accr3g01876 428 PANTHER CYSTATHIONINE BETA-SYNTHASE 51 409 - -
Accr3g01876 428 Pfam Pyridoxal-phosphate dependent enzyme 53 395 IPR001926 -
Accr3g01876 428 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 77 95 IPR001216 GO:0006535
Accr3g01876 428 Gene3D - 85 190 IPR036052 -
Accr3g01876 428 Gene3D - 215 236 IPR036052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01876 Accr-Chr3 26180838 26184867 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01876 55 402 Miscellaneous Gene Families AT3G04940 30.484 1.78e-34 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01876 K01738 - zju:107407993 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01876 3 26180838 26184867 Accr3g01876 3 26180838 26184867 ECH