Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01802 ATGAGCGAGAACGTGATTGAAAGTGAGCCATTGATTGCTCGTGCTTCAGATTCAGGGCTCATCAGCGACCATGACAGAACAGGGGGAACATGGAGTGCGGTGGCGCACATTATCACGGGAGTGATCGGAGCCGGGGTGCTGTCACTGGCATGGGCGACGGCGCAGCTAGGGTGGATCGCAGGTCCATTGTGCATCCTAGTGTTCGCAATGGTAACCATTGGATCTGCATACCTCATAGCTGACTGCTATAGATACCCTCATCCTGACACTGGAGATCTCAGAAACCGCTCCTTAATTGATGCAGTCAATCACTACCTAGGGGAGACAAATAAAACGGTGTGCGCAATATTGGTAAACGAGAGTCTTTGTGGCGCTACCATTACCTATATTTTTACAACAGCTTCCAGTATCAGGGCAATTCTGAAGTCAAACTGTTATCACAAGTATGGACACAATGCACCTTGTCACTATGGAGAAACCTTGTTCATGGTGGTGTTTGGAGTTGTACAGTTCTTTATGTCATTCATACCAGATCTTCATAATATGGCTTGGCTTTCGGTTGTTGCTGCAATTATGTCATTTTCATATTCTTTTATTGGACTCGGACTTGGCATTGCAAAAGTTATTGAAAATGGGACAATCAAGGGGAGCATAACAGGAGTACCAACTAGTAGCTCTGTTGACAAGATGTGGTTAGTGTTCCAAGGAATTGGTGACATTGCCTTTGCTTATCCATACTCGGTTCTTCTTCTTGAAATACAAGATACGTTGAGGTCTCCTCCACCGGAAAACCAGACCATGAAGAAGGCCTCTTTTATATCAGTCCTTATCACAACCTTCTTCTACCTTTGTTGTGGATGCTTTGGATATGCAGCATTCGGAAGTGATACGCCCGGAAACTTATTGACCGGCTTCGGCTTCTACGAGCCTTACTGGCTCATTGACTTTGCTAATGCTTGCATTGTAGTTCATTTGGTGGGAGGATATCAGATATACAGTCAGCCAATATTTGCAGCTGCTGATAGATTTTGTTCTAGAAGGTTCCCAAACAGTAACTTTGTGAACAAACTTTACCCAGTGAAGCTCCCACTCTTGCCTGTGTTTCAGCTGAGTTTATTTAGGCTCTGTTTCAGAACAGTGTATGTGGTTTTCACAACAGGCATAGCCATCCTCTTCCCTTACTTCAACCAGGTCCTTGGAGTTTTAGGCGCTTTGAACTTTTGGCCATTGACCATTTACTTCCCTGTGGAGATGTACTTTGTGCGGAAGAAAATTGGTGCTTGGACTACCAAATGGATTGTTCTTAGGTCCTTTAGTCTTGTTTGCTTAATTGTTAGTGTTTTGGGACTTGTTGGGTCTATTGAGGGGGTCATTAAGGAGAAACTCGGCTAA 1392 0.444 MSENVIESEPLIARASDSGLISDHDRTGGTWSAVAHIITGVIGAGVLSLAWATAQLGWIAGPLCILVFAMVTIGSAYLIADCYRYPHPDTGDLRNRSLIDAVNHYLGETNKTVCAILVNESLCGATITYIFTTASSIRAILKSNCYHKYGHNAPCHYGETLFMVVFGVVQFFMSFIPDLHNMAWLSVVAAIMSFSYSFIGLGLGIAKVIENGTIKGSITGVPTSSSVDKMWLVFQGIGDIAFAYPYSVLLLEIQDTLRSPPPENQTMKKASFISVLITTFFYLCCGCFGYAAFGSDTPGNLLTGFGFYEPYWLIDFANACIVVHLVGGYQIYSQPIFAAADRFCSRRFPNSNFVNKLYPVKLPLLPVFQLSLFRLCFRTVYVVFTTGIAILFPYFNQVLGVLGALNFWPLTIYFPVEMYFVRKKIGAWTTKWIVLRSFSLVCLIVSVLGLVGSIEGVIKEKLG 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01802 463 PANTHER OS05G0424000 PROTEIN-RELATED 30 454 - -
Accr3g01802 463 Pfam Transmembrane amino acid transporter protein 27 458 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01802 Accr-Chr3 24036078 24087788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01802 23 445 Organic Solute Cotransporters AT1G77380 53.412 1.63e-168 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01802 K24917 - cit:102628828 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g01599 4 16645051 16647762 Accr3g01802 3 24036078 24087788 CCT
Accr3g01802 3 24036078 24087788 Accr3g01802 3 24036078 24087788 ECH