Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01796 ATGGGGGAAGATCAAAAGGCCCCTCTCTTACAATCTCAATCTTCTCATCATCATCATCAGGTCAAACGAACAGGGACGGTATGGACTGCGGTGGCGCACGTAGTGACGGGGGTGATAGGTTCCGGAGTGTTATCGCTGGCTTGGAGCATGGCGCAGCTTGGGTGGATTGGAGGGCCATTGGCGATGATTATGTTTGCTGCTGTTACTTTGCTCTCTTCGTTCCTTCTCTCCAACACATACCGTTCTCCAGATCCTGAATATGGCCCTCATAGGCATCCCTCTTACATTCATGCTGTTAATTTGCATTTAGGAACAAAGAAAGGAAATTTGTGTGGCTTTTTGGTTCAATTAAGCTTATATGGGTTTGGAGTGGCCTACATTGTTACATCAGCTATTAGCATAAGAGCAATTCTAAAATCAAACTGTTACCACTTTGACGGGCGCGGAGCAGCATGTATTTTTGGGGATGCATATTATATGATGATTTTTGGGATCATCCAAATTGTTTTGTCACAGATACCCAATTTCCATAACATTGAGTGGTTATCAATTGTTGCTGCAATTATGTCATTTACGTATGCTTTCATTGGAATGGGTCTTGCTGTTGCTCAAATCATAGGAAATGGATTCATAATGGGTAGTACATATGGTATCCATACCCATAGTGTCACTGCAAAATTCTGGCTGGTTGCTCAAGCGCTCGGTGACATAGCATTTTCCTATCCATTCTCTGTAATTCTTATAGAAATACAGGATACCTTGAAGTCACCTCCACCAGAAAATCAAACCATGAGGAAGGCTTCAACAATATCAGTACTTGTCACTACATTTTTTTACCTCTGTTGCGGATGTTCTGGATATGCAGCCTTTGGTAGCGGCACGCCAGGAAACCTTTTAACAGGATTTGGATTTTATGAGCCTTTTTGGCTTGTTGACTTAGCCAATGTTTGTATAGTGATTCACCTCGTTGGCGCTTATCAGGTGTACAGCCAGCCACTATATGCAAATGTTGAAGATTGGTTCCGCCAGAAGTTCCCAGAAAGTGCATTTGTGAACCATACATATTCCTTGAAACTCCCATGTCTGCCAGCTTTTGGGCTAAATTTTTTGAGGCTGACTTTCCGTACTGGTTATGTTATATCAACGACTGTGGTTGCAGTGCTCTTCCCCTACTTCAATCAGATTTTGGGAGTTTTGGGAGGCATAATATTCTGGCCATTAACCATATATTTCCCAGTGGAAATGTACTTGAGTCAGTATGATGTTGAAGCATGGACACCTAAGTGGGTCTTACTACGGACTTTTAGCATCGTTGGCTTTGTGGTGGGAACATTCACTCTTGTTGGTTCCATCGAAGGAATAATAACTGCAAAACTAAGCTAA 1383 0.4244 MGEDQKAPLLQSQSSHHHHQVKRTGTVWTAVAHVVTGVIGSGVLSLAWSMAQLGWIGGPLAMIMFAAVTLLSSFLLSNTYRSPDPEYGPHRHPSYIHAVNLHLGTKKGNLCGFLVQLSLYGFGVAYIVTSAISIRAILKSNCYHFDGRGAACIFGDAYYMMIFGIIQIVLSQIPNFHNIEWLSIVAAIMSFTYAFIGMGLAVAQIIGNGFIMGSTYGIHTHSVTAKFWLVAQALGDIAFSYPFSVILIEIQDTLKSPPPENQTMRKASTISVLVTTFFYLCCGCSGYAAFGSGTPGNLLTGFGFYEPFWLVDLANVCIVIHLVGAYQVYSQPLYANVEDWFRQKFPESAFVNHTYSLKLPCLPAFGLNFLRLTFRTGYVISTTVVAVLFPYFNQILGVLGGIIFWPLTIYFPVEMYLSQYDVEAWTPKWVLLRTFSIVGFVVGTFTLVGSIEGIITAKLS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01796 460 Pfam Transmembrane amino acid transporter protein 23 455 IPR013057 -
Accr3g01796 460 PANTHER OS05G0424000 PROTEIN-RELATED 25 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01796 Accr-Chr3 23868486 23872448 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01796 16 455 Organic Solute Cotransporters AT5G09220 49.887 2.88e-165 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01796 K24917 - qsa:O6P43_021361 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01796 3 23868486 23872448 Accr3g01796 3 23868486 23872448 ECH