Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01614 ATGTCTCTGCGCCTGGTAGCAGCAAATTTACTCAAGAAGTTTCGCTTTCCTCCTCGCAATGCTTCTTCTACTTCTGTAGTAACCTCTAATACGTTGCCCATCTCACTTCCTGGCAAAAGTATTACTTTTCATTGGCATCGAACTGGTGCACATGGTTGGAAGACGGGCTCTAGGGGTCCTTTCCCATGGATGGTGATATATGGACATCTTGCATTAATTATTGGCATTAATGCCAACCCTGTGTTTGCAAAAGATGCATCAACAGAAGCTGTTTTTGATAGTGACACTGAGAAGGATGACATAACTGGATTGCAAAAAATTGAGGATGGCTCTGTAGTATCAAATATACACACATCGAAATGGAGGGTCTTTACTGATAAAGGGAGAGAATTTTTTCTTCAGGGAAAAATAGATGAAGCTGAAAAGCTCTTCCTTTCTGCAGTACAAGAAGCTAGAGAAGGTTTTGGCCAGAGAGACCCACATGTTGCATCTGCATGCAACAATCTGGCTGAGTTGTACAGAGTCAAGAAGGCTTTTGACAAAGCAGAGCCGCTGTATTTAGAAGCTATCAGCATATTGGAGGAATCATTTGGACCTGAAGATATACGAGTGGGAGCTGCTGCTCATAACCTTGGGCAGTTCTTCCTTGGACAGCGGAAGTTGGAAGAAGCTCATGTTTACTACTCGATGGCTTTCAAGATAAAAAGGCGGGTTTTGGGATATAACCATCCAGACTGTTCTGATACAATGTATCATCTAGGAGTGGTGCTGTGTCTTCAAGGAAAGGAAGGGGAAGCTGAGGCCTTTATTCAAGACTCCATAAGAATGCTAGAGGAAGGTGGTGAAGGGGAGTCCATTATATGCATAAGAAGACTTCGATACCTTTCTCAGATATATATGAAATCAAATCGACATGCTGAAGCTGAGATGATTCAGAGAAGGATTCTACATAAAATGGAACTATCAAAGGGGTGGAATTCTCTTGAAACTATCGCTGCGGCTGAGAGTTTGGCTCTGATTCTGCAAGCATCTAATAATTTGAGAGATTCACAAGAGCTTCTTGAAAGATGTCTTAATGCTCGGAAAGCCATACTTCCCCACGACCATATTCAGATTGGTGCTAACCTGCTTCATCTAGCAAGGGGAGTGGTGCTCAAAAGCAGCCAACTGCAGAAGTGGGATGTTTCTGGCCAAGCTGAGCTTGACAGGGCAAAGCATCAATTGAATGATTCCATAAGGATTGCCCGTCAAGTTTTAAATAAATTACTGAAACAAAAAGTCTACACTAAAGATTACAGTTCACTAGGACGTTCTACAAAGGAAAGACAAGCGGCATTAATCATACTGTTGCAATCACTCAGTACTTTGGCGTCATTGGAGTTAGCTAAGCAAGAATTGCTGGGAACTCAGGAAGAGCATATGAATCTTGAAGCTCGGAAGGCACTTGTTCAATGTGTTTCCGCTTATAGTGAGTATGTATCAGAGAGGTCAGTTGCTGATTCCCCTGAAATAAAGAAACAGTACCTTTCATGTTTAAAGCGTGCTCAAGACTTGCTTGGTGGTAAATTTACTGAGGAGCCGACCAGTTAA 1590 0.4233 MSLRLVAANLLKKFRFPPRNASSTSVVTSNTLPISLPGKSITFHWHRTGAHGWKTGSRGPFPWMVIYGHLALIIGINANPVFAKDASTEAVFDSDTEKDDITGLQKIEDGSVVSNIHTSKWRVFTDKGREFFLQGKIDEAEKLFLSAVQEAREGFGQRDPHVASACNNLAELYRVKKAFDKAEPLYLEAISILEESFGPEDIRVGAAAHNLGQFFLGQRKLEEAHVYYSMAFKIKRRVLGYNHPDCSDTMYHLGVVLCLQGKEGEAEAFIQDSIRMLEEGGEGESIICIRRLRYLSQIYMKSNRHAEAEMIQRRILHKMELSKGWNSLETIAAAESLALILQASNNLRDSQELLERCLNARKAILPHDHIQIGANLLHLARGVVLKSSQLQKWDVSGQAELDRAKHQLNDSIRIARQVLNKLLKQKVYTKDYSSLGRSTKERQAALIILLQSLSTLASLELAKQELLGTQEEHMNLEARKALVQCVSAYSEYVSERSVADSPEIKKQYLSCLKRAQDLLGGKFTEEPTS 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01614 529 Coils Coil 459 479 - -
Accr3g01614 529 Pfam Tetratricopeptide repeat 162 200 - -
Accr3g01614 529 Pfam Tetratricopeptide repeat 330 370 - -
Accr3g01614 529 SMART tpr_5 163 196 IPR019734 GO:0005515
Accr3g01614 529 SMART tpr_5 247 280 IPR019734 GO:0005515
Accr3g01614 529 SMART tpr_5 121 154 IPR019734 GO:0005515
Accr3g01614 529 SMART tpr_5 205 238 IPR019734 GO:0005515
Accr3g01614 529 Gene3D Tetratricopeptide repeat domain 283 508 IPR011990 GO:0005515
Accr3g01614 529 Pfam Tetratricopeptide repeat 206 279 - -
Accr3g01614 529 Gene3D Tetratricopeptide repeat domain 125 282 IPR011990 GO:0005515
Accr3g01614 529 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 524 - -
Accr3g01614 529 SUPERFAMILY TPR-like 242 360 IPR011990 GO:0005515
Accr3g01614 529 SUPERFAMILY TPR-like 117 266 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01614 - - gmx:100813040 696.041