Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01603 ATGGCTTTGCATTTGCTTCTGCTGCTTCTAACAACATTTCTTAGTGCTGCTACTGCTGATGATGGACCGTTTATTGGGGTGAACATTGGGACAGATCTCTCAGACATGCCACACCCAACACAAGTTGTAGCACTACTTAAAGCCCAGCAAATCCGGCATGTTCGGTTGTATGATGCTGATCAAGCTATGCTTATTGCACTTGCCAAGTCAGGCATTGAAGTTGTTGTATCTGTCCCTAATGAAGAGCTTCTGGCAATAGGCCAATCGAACTCCACGGCTGCTAACTGGGTTTCGCGCAATGTGGTGGCACATTACCCGGCCACCAACATCACGGTCATTTGTGTTGGCTCTGAGGTCCTGACCACCCTCCCAAATGCAGCCAAAATCCTTGTCAATGCCATTAAGTACATTCATTCGGCCCTTGTGGCAACAAACCTCGATCGCCAAATCAAAGTTACAACACCACTTCCTTCCAACATCATCCTTGACTCATTCCCTCCTTCCCAGGCCTTTTTCAATCGATCCATGAACTCTATTTTGGTCCCATTGCTTGATTTCTTGCAATCCACTGACTCTTTCCTCGCGCTTAACGTGTATCCTTACTATGATTACATGAAGTCCAATGGTGTGATTCCATTAGAATATGCACTCTTCAAGCCTCTCCCTCCAAACAAAGAAGCTGTGGACTCCAACACTCTTCTTCACTACTCCAATGTCTTTGATGCAGTGGTTGATGCAGCCTACTTCGCCATGTCCTTTCTGAACTACACTAACATTCCTGTGGTAGTGACAGAGTCGGGCTGGCCCTCAAGGGGCGATTCGAATGAGCCTGATGCTACGGTTGACAATGCTAATACTTATAACAGTAATTTGATCAAGCATGTGCTGAACAAAACTGGAACTCCCAAACATCCTGGGATTGCTGTTAGTACATACATCTATGAGCTGTACAATGAGGATAACAAGCCCGGGCTGGTGTCAGAGAAGAACTGGGGATTGTTTGATGCAAATGGGGAACCTATTTATATTTTGCACTTGACAGGATCAGGAGCTGTTTTGGCTAATGATACCACTAATCAAACTTTTTGCATTGCAAAAGATGGTGCTGACCCTAAGATGGTGCAGGCTGCACTAGATTGGGCATGTGGACCTGGGAAAGTGGATTGCTCTGACTTGCTTCAGGGACAGCCTTGTTATGAACCGGACAACGTGCTTGCTCATGCGACTTATGCTTTCCACGCGTACTATACTAAGATGGGGAAGTCTCCTGAGGCATGTGATTTCAATGGAGTGGCTACTGTTTCTACCACAGATCCAAGTCATGGTTCGTGTATATTTCCAGGAAGTCATGGAAAGAATGGCACCTTGTCAAACATAACAGCACCATCAATGAATTCCACAAGTTCAGATTCTTCTGCCAGCGATTTCCACGGCTGTGAACTGATGAGAATCAGAAGCATTTTAATGGTGATAGGATTCTTAGTGTGGGGGCTGGTTTTGTAA 1503 0.4558 MALHLLLLLLTTFLSAATADDGPFIGVNIGTDLSDMPHPTQVVALLKAQQIRHVRLYDADQAMLIALAKSGIEVVVSVPNEELLAIGQSNSTAANWVSRNVVAHYPATNITVICVGSEVLTTLPNAAKILVNAIKYIHSALVATNLDRQIKVTTPLPSNIILDSFPPSQAFFNRSMNSILVPLLDFLQSTDSFLALNVYPYYDYMKSNGVIPLEYALFKPLPPNKEAVDSNTLLHYSNVFDAVVDAAYFAMSFLNYTNIPVVVTESGWPSRGDSNEPDATVDNANTYNSNLIKHVLNKTGTPKHPGIAVSTYIYELYNEDNKPGLVSEKNWGLFDANGEPIYILHLTGSGAVLANDTTNQTFCIAKDGADPKMVQAALDWACGPGKVDCSDLLQGQPCYEPDNVLAHATYAFHAYYTKMGKSPEACDFNGVATVSTTDPSHGSCIFPGSHGKNGTLSNITAPSMNSTSSDSSASDFHGCELMRIRSILMVIGFLVWGLVL 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01603 500 SMART X8_cls 361 446 IPR012946 -
Accr3g01603 500 FunFam Glucan endo-1,3-beta-glucosidase 3 24 349 - -
Accr3g01603 500 Pfam X8 domain 362 433 IPR012946 -
Accr3g01603 500 FunFam Glucan endo-1,3-beta-glucosidase 4 356 450 - -
Accr3g01603 500 SUPERFAMILY (Trans)glycosidases 25 344 IPR017853 -
Accr3g01603 500 Gene3D Glycosidases 24 350 - -
Accr3g01603 500 ProSitePatterns Glycosyl hydrolases family 17 signature. 259 272 IPR000490 GO:0004553|GO:0005975
Accr3g01603 500 Pfam Glycosyl hydrolases family 17 25 344 IPR000490 GO:0004553|GO:0005975
Accr3g01603 500 Gene3D - 355 453 - -
Accr3g01603 500 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 11 434 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01603 Accr-Chr3 19338913 19341620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01603 19 491 Glycoside Hydrolase AT1G66250 72.211 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01603 K19891 - gmx:100792634 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01603 3 19338913 19341620 Accr3g01603 3 19338913 19341620 CCT
Accr3g01603 3 19338913 19341620 Accr3g01603 3 19338913 19341620 ECH