Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01527 ATGCCTTTCATCTCGCAATTTCAACGTCAGTCTGATTACAATCTCTTCAGTCCCACCACTCCGATCGTCATTGACAATGGCGCATCTTATTTTCGTATCGGATGGGCAGGAGAGACTGAACCTCGTGTTGTTTTCCGCAACATTGTGCAAAGGCCACGCCATAAAGTCACCGGTGAAACTGTCACTATTGTTGGTGATCACAATCCAGCATTAATGAAATACTTTGACTGCACTCGCTCTGGACCACGCTCAGCATTTGATAGCAATGTTGTGTATCAGTTTGAAATAATGGAATACATTCTTGACTTTGGCTTTGACCGGATGGGAGCAAATGGATTAGAGATTGATCATCCTGTCCTGATCACAGAATGTGTGTGTAATCCAGTTCAGTCTCGTAGTAAAATGGCAGAACTTCTTTTTGAGACTTACGGTGTTCCATCAATAGCCTTTGGGGTTGATGCAGCTTTCAGCTACAAGTATAATCAACACCATGGAGTTTGCAATAAAGATGGTCTTGCTATGTGTCCTGGATTTACCACAACCCATGTGATTCCGTTTGTAGATGGGGAACCTGTTTATAAAGGATGCTGCCGAACAAATATTGGTGGCTATCATGTAACTGACCATTTAAAGCAACTTCTTTCACTTAAATATCCCTACCATTTGGCTAGGTTTACATGGGAAAAGGTTGAAGACCTGAAGATGGAACATTGTTACATTGCACAGGATTATGCGTCTGAAGCTCAGCTGTTTCGGAGAGGAGGGAAGGAAGCTGAAGAGAAAACCAGATGTTGGCAGCTCCCTTGGGTTCCACCACCAACTGAGGAGCCTCCTTCTGAGGAAGAGATTGCAAGAAAGGCAGCAATTAGAGAGAGACAAGGTCAAAGGTTGCGAGAAATGGCTGAGGCAAAGAGATCATCCAGAATAAATGAACTGGAAAATGAATTGCATGGTTTGGAGTTTCTCTTACAACAGCTTGATCAAGTAGAAGAGAGTGACATTCCATCTTTCCTATCAGACACTGGCTATGTCTCTAAGCAGGAGATAGAATCTGCCCGTGCCAAAGTTACACAATCTTTACGGAAAGCAAAAGGTGAACCAAAGAGTGATCAAGCTGAAACTGAAAGGGCTGACTCTGCTAATAGCGAGAAGTATTCTCTTATAAACATCCCCGATGAAACACTAACACCAGAACAGCTTGTTGAAAAGAAGAAGCAGCTGGCACTCAAGTCCATGTCTGAAGGGCGTCAGCGTTCAAAACAGAAACGCTATGAGGAGGAAATGCAACGAGAGAGGAGATTACAGCTAGAGGAGGAGAAACGACTAGAGAACCCAGAGCTGTACCTGGAGCAATTGCATGCTAAATACAAAGATCTATCAGAAAAAGTTGACCAACGAAAAAGACTCAAGACAAATGGAAACCACACAAATGGAAACAATTTGTCTGGTGGTGTTGGTCGTGGCGAGAGGCTAAATGCTGCTCAAAGGGAAAGAATGCGCCTGTTGACAACTGCAGCCTTCGATCGCGGTAAAGGTGAGGATACATTTGGCGCCAGAGATGAGGATTGGCACCTCTACAAATTGATGAGTAGGGATAACGATGATGATGACGAGGGTCCCGACGAGGATGAGGCGGAACTGGCCCGCATCTCTTCTAGGCTTCAGGATTTGGATCCTACATTTGTACCCAAGTTAGATACTGGTAATGCACAATCTGCTGAGGCAGTGCCACGTTCTCGACCTCTCACGAAAGAGGATTTCCAGATCATTTTTGGAGTTGAAAGATTCAGATGCCCCGAGATTCTGTTCAATCCAAACTGGATCGGGGTTGATCAGGTAGGGTTAGACGAGATGGCCGGGGTGTCGATAAGGCGGTTGCCGGACAAGGATGAAAGTTTGGAAGAGAGACTAACTGATTCCATTCTTGTGACTGGTGGGAGTTCTGTGTTTCCCGGTATGATCAAACGCCTTGAAGCTGCGATTAGGATGATCAGACCATGCGGATCACCCATAAGAGTAGTGAGAGCATTGGATCCAGTTTTGGATGCATGGAGGGGTGCTTCTGCTTATGCCTCAGCTTCTCTGTTTCATACACAAACTTTCAGTAGGGCGGATTATTATGAGAAGGGTGAAGATTGGCTTCGTGGTTATCAACTCAAATATACCATATAG 2172 0.4484 MPFISQFQRQSDYNLFSPTTPIVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKVTGETVTIVGDHNPALMKYFDCTRSGPRSAFDSNVVYQFEIMEYILDFGFDRMGANGLEIDHPVLITECVCNPVQSRSKMAELLFETYGVPSIAFGVDAAFSYKYNQHHGVCNKDGLAMCPGFTTTHVIPFVDGEPVYKGCCRTNIGGYHVTDHLKQLLSLKYPYHLARFTWEKVEDLKMEHCYIAQDYASEAQLFRRGGKEAEEKTRCWQLPWVPPPTEEPPSEEEIARKAAIRERQGQRLREMAEAKRSSRINELENELHGLEFLLQQLDQVEESDIPSFLSDTGYVSKQEIESARAKVTQSLRKAKGEPKSDQAETERADSANSEKYSLINIPDETLTPEQLVEKKKQLALKSMSEGRQRSKQKRYEEEMQRERRLQLEEEKRLENPELYLEQLHAKYKDLSEKVDQRKRLKTNGNHTNGNNLSGGVGRGERLNAAQRERMRLLTTAAFDRGKGEDTFGARDEDWHLYKLMSRDNDDDDEGPDEDEAELARISSRLQDLDPTFVPKLDTGNAQSAEAVPRSRPLTKEDFQIIFGVERFRCPEILFNPNWIGVDQVGLDEMAGVSIRRLPDKDESLEERLTDSILVTGGSSVFPGMIKRLEAAIRMIRPCGSPIRVVRALDPVLDAWRGASAYASASLFHTQTFSRADYYEKGEDWLRGYQLKYTI 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01527 723 Gene3D Actin; Chain A, domain 4 203 253 - -
Accr3g01527 723 SMART actin_3 19 719 IPR004000 -
Accr3g01527 723 SUPERFAMILY Actin-like ATPase domain 170 715 IPR043129 -
Accr3g01527 723 PANTHER ACTIN 21 711 IPR004000 -
Accr3g01527 723 Coils Coil 346 366 - -
Accr3g01527 723 FunFam Actin-related protein 5 203 257 - -
Accr3g01527 723 Gene3D - 19 444 - -
Accr3g01527 723 MobiDBLite consensus disorder prediction 355 380 - -
Accr3g01527 723 Gene3D - 176 202 - -
Accr3g01527 723 Gene3D - 683 711 - -
Accr3g01527 723 Coils Coil 421 441 - -
Accr3g01527 723 Gene3D - 613 682 - -
Accr3g01527 723 Coils Coil 309 329 - -
Accr3g01527 723 FunFam Putative actin-related protein 5 683 711 - -
Accr3g01527 723 MobiDBLite consensus disorder prediction 408 428 - -
Accr3g01527 723 MobiDBLite consensus disorder prediction 355 391 - -
Accr3g01527 723 FunFam Actin-related protein 5 171 202 - -
Accr3g01527 723 SUPERFAMILY Actin-like ATPase domain 19 159 IPR043129 -
Accr3g01527 723 FunFam Actin-related protein 5 18 170 - -
Accr3g01527 723 Coils Coil 449 469 - -
Accr3g01527 723 Gene3D Actin; Chain A, domain 4 519 612 - -
Accr3g01527 723 Pfam Actin 588 714 IPR004000 -
Accr3g01527 723 Pfam Actin 19 268 IPR004000 -
Accr3g01527 723 CDD NBD_sugar-kinase_HSP70_actin 22 202 - -
Accr3g01527 723 MobiDBLite consensus disorder prediction 559 579 - -
Accr3g01527 723 FunFam ARP5 actin-related protein 5 homolog 613 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01527 Accr-Chr3 18113167 18118569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01527 570 710 Miscellaneous Gene Families AT2G42100 33.803 3.06e-16 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01527 K11672 - gmx:100808396 1224.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01527 3 18113167 18118569 Accr3g01527 3 18113167 18118569 CCT
Accr3g01527 3 18113167 18118569 Accr3g01527 3 18113167 18118569 ECH