Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01513 ATGGCGGCTGCCTCCCTCTCCACCGTCGGAGCAGTCAACAGAACTCCTCTGAGCATTAATGGGTCTGGGGCTGGGGTTTCGGTTTCTAGCTCGTCTTTCATGGGAACAAGCTTGAAGAAGGTTCTTACTGCAAGGCTTCCAAGCTACAAGGCTTCATCTGGGAACTTTAAGGTTTTTGCTGCAGCAGAGAAAGAGATTGATGAGGAGCAACAGACAGACAAGGACAAGTGGAAGGGTCTGGCTTATGACATATCAGATGACCAGCAAGATATCACCAGAGGGAAGGGAATGGTGGACTCTCTCTTCCAAGCTCCCATGCAAACTGGAACTCACTATGCTGTCATGAGCTCTTACGAGTACCTCAGCGCCGGACTTCGCCAGTACAACCTTGACAACAACATGGATGGTTTTTACATTGCTCCTGCTTTCATGGACAAGCTTGTTGTTCACATCACCAAGAACTTCATGACCCTCCCCAACATCAAGATTCCTCTCATCCTTGGTATCTGGGGAGGCAAAGGTCAAGGGAAATCTTTCCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAACCCCATCATGATGAGTGCCGGAGAGCTGGAAAGTGGTAACGCCGGAGAGCCAGCAAAATTGATCAGACAAAGGTACCGTGAAGCAGCAGACATAATCAAGAAGGGAAAGATGTGCTGTCTATTCATCAACGATCTCGACGCCGGAGCTGGTCGTATGGGAGGGACCACCCAATACACAGTGAACAACCAGATGGTGAACGCCACCCTCATGAACATCGCCGACAACCCCACCAACGTGCAGCTCCCCGGTATGTACAACAAGGAGGAGAACCCACGTGTCCCCATCATCGTCACCGGTAACGACTTCTCCACCCTCTACGCCCCACTCATCCGTGACGGTCGTATGGAGAAATTCTACTGGGCCCCCACCCGAGAAGACCGTATCGGTGTCTGCAAGGGTATCTTCCGTACCGACGGCGTCGCCGATGCGGACATCGTCAAAATCGTGGACACCTTCCCAGGCCAATCCATTGATTTCTTTGGAGCGTTGAGGGCAAGAGTGTATGACGACGAGGTGAGGAAGTGGATCTCCGGGATCGGAGTAGAGGGCGTAGGGAAGAAGCTGGTGAACTCGAAGGAGGGGCCGCCGACATTCGAGCAGCCGAAGATGACGGTTGAAAAGCTGTTGGAGTACGGAAACATGTTGGTGCAAGAACAGGAGAACGTGAAGAGAGTGCAATTGGCTGACAAGTACCTGAACGAGGCTGCACTTGGTGATGCCAACAAAGATGCTATTTCAAGTGGATCTTTCTACGGGCAAGCAGCACAGCAAGTACACATACCTGTTCCAGAAGGATGTACTGATCCCAATGCCGCAAACTTTGACCCAACCGCAAGGAGTGATGATGGAAGCTGTTTATATAAATTCTAA 1443 0.5107 MAAASLSTVGAVNRTPLSINGSGAGVSVSSSSFMGTSLKKVLTARLPSYKASSGNFKVFAAAEKEIDEEQQTDKDKWKGLAYDISDDQQDITRGKGMVDSLFQAPMQTGTHYAVMSSYEYLSAGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVADADIVKIVDTFPGQSIDFFGALRARVYDDEVRKWISGIGVEGVGKKLVNSKEGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYLNEAALGDANKDAISSGSFYGQAAQQVHIPVPEGCTDPNAANFDPTARSDDGSCLYKF 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01513 480 Gene3D - 314 426 - -
Accr3g01513 480 PANTHER - 22 478 IPR044960 -
Accr3g01513 480 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 314 426 - -
Accr3g01513 480 Pfam ATPase family associated with various cellular activities (AAA) 169 310 IPR003959 GO:0005524|GO:0016887
Accr3g01513 480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 345 IPR027417 -
Accr3g01513 480 Gene3D - 129 313 IPR027417 -
Accr3g01513 480 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 129 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01513 Accr-Chr3 17830910 17833703 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01513 - - gmx:100789921 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01513 3 17830910 17833703 Accr3g01513 3 17830910 17833703 ECH