Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01497 ATGGGTGACTTCAAGCCTTTCTCAGACTCGGGTTCGGCCTCAATTTCACTGTCAATTAGCGAGACTGTTAATGGTTCGCACCATTTTACCATAAAGGGGTATTCTTTGGCCAAAGGGATGGGCGCTGGGAGGTATATAACGAGCGACACATTTAGCGTTGGTGGCTACGATTGGGCAATTTATTTCTACCCTGATGGGAAGAACCAAGAGGATAATTCCATATATGTTTCGGTTTTTATAGCCTTGGCGAGCGAAGGAACTGACATTAGGGCTTTGTTCAAGTTGACTTTGATCGACCAGAGTGGGAAAGGCAACGATAAAGTGCATAGTCATTTTGATCGCCCGTTGGCGAGTGGACCTTATACGTTGAAGTATAGAGGCAGCATGTGGGGTTATAAGCGTTTTTTCAAAAGAACATCATTGGAAAATTCAGAGTATCTGAAAGACGATTGCCTTGTCATGCATTGCACTGTTGGTGTTGTGAGAACTCGTGTTGAGGGAACTAAGAAGAATGTTATTATACTACAACATGGCATGGGTGAGGATTTTAAGGGTTTGTTAGAATCTGAAGTTGGTTGTGACATAGTTTTTAAAGTTGGGAATGAAAGCTTCAAAGCTCATAAGTTGATACTTGCTGCACGATCTCCTGTCTTTAGAGCTCAGTTTTTTGGACTTGTTGGGGATACCAGCAGGGATGAAGTGGTGTTAGAGGATATTGAGCCTTTTATCTTCAAGGCAATGCTTCTCTACATCTATACAGATAAACTTCCTGACATCCATGAGGTTATGGGCTCAATACCTATGTGCTCACAGACTGTCATGTTGCAACATCTATTGGTTGCTGCCGATCTGTATAATCTTGATCGGCTGAAAATGTTATGTGAATCAATTTTATGTGAAGAAATCAATACTAACACTGTAGCAACATCACTTGCACTGGCTGAGCAACATCACTGCCCACAACTTAAGGCCTCTTGTTTAAAATTTGTTGCACATCCAGCAAATTTAGGAGTGGTAATGCAATCCGAAGCCTTCGTGCACTTGAAGGAGAGCTGCCCTTCAATGTTGTCGGAGTTACTGGAGGCATTTGCATTGGTGGACGACACATTGAGCAAGAAGAGGAGCAGCAGTAACGTATATGGGCAAGATGTAACCGATGAGATGGCTGAAGCATCAATTAATCCAAGCGGCAGGCATTTCAAGAGGCGGATGTAG 1215 0.4296 MGDFKPFSDSGSASISLSISETVNGSHHFTIKGYSLAKGMGAGRYITSDTFSVGGYDWAIYFYPDGKNQEDNSIYVSVFIALASEGTDIRALFKLTLIDQSGKGNDKVHSHFDRPLASGPYTLKYRGSMWGYKRFFKRTSLENSEYLKDDCLVMHCTVGVVRTRVEGTKKNVIILQHGMGEDFKGLLESEVGCDIVFKVGNESFKAHKLILAARSPVFRAQFFGLVGDTSRDEVVLEDIEPFIFKAMLLYIYTDKLPDIHEVMGSIPMCSQTVMLQHLLVAADLYNLDRLKMLCESILCEEINTNTVATSLALAEQHHCPQLKASCLKFVAHPANLGVVMQSEAFVHLKESCPSMLSELLEAFALVDDTLSKKRSSSNVYGQDVTDEMAEASINPSGRHFKRRM 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01497 404 CDD MATH 25 158 IPR002083 GO:0005515
Accr3g01497 404 FunFam BTB-POZ and math domain 1 170 296 - -
Accr3g01497 404 SUPERFAMILY TRAF domain-like 21 160 - -
Accr3g01497 404 CDD BACK_AtBPM-like 299 362 IPR034090 -
Accr3g01497 404 CDD BTB_POZ_BPM_plant 179 299 - -
Accr3g01497 404 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 23 162 IPR008974 GO:0005515
Accr3g01497 404 SUPERFAMILY POZ domain 179 300 IPR011333 -
Accr3g01497 404 SMART math_3 29 141 IPR002083 GO:0005515
Accr3g01497 404 SMART BTB_4 193 302 IPR000210 GO:0005515
Accr3g01497 404 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 18 360 IPR045005 GO:0016567
Accr3g01497 404 ProSiteProfiles BTB domain profile. 193 256 IPR000210 GO:0005515
Accr3g01497 404 Pfam BTB/POZ domain 183 300 IPR000210 GO:0005515
Accr3g01497 404 Gene3D - 304 377 - -
Accr3g01497 404 ProSiteProfiles MATH/TRAF domain profile. 24 158 IPR002083 GO:0005515
Accr3g01497 404 Gene3D Potassium Channel Kv1.1; Chain A 174 303 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01497 Accr-Chr3 17522866 17527884 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01497 K10523 - gmx:100786636 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01497 3 17522866 17527884 Accr3g01497 3 17522866 17527884 ECH