Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01496 ATGAATGGCATTGGAGATGAACCAGGAGGTGAAGCCGCGGCATTGCAAGGATGCAAGGTCTACATGTGGGGTTACCTCCCTGGAGCTCTCCCGCAGAGGTCGCCGCTCTTAACGCCCGTGCCTGTTAGGGTTCCGGCTTCGACTGGTTCTGCTGGTTACTCCTGGAAGGATGTTTGCGGTGGCGGTTGTGGATTCGCCATGGCTATCTCTGACTCAGGAAAGCTTATTACTTGGGGATCAACTGATGATCTAGGTCAAAGCTATGTGACAGCTGGCAAGCACGGGGAAATTCCTGAGCCTTTCCCTATCCCAACTGAAGCTTCTATTATAAGGGCTGCAGCTGGATGGGCACATTGTGTTGCTATTACTGATGGTGGTGAAGTTTACACATGGGGTTGGAAGGAATGTGTTCCATCTGGGAAGGTATTTGGCGAATCATCAACAGGGGCAAGTCTTGAAAAGGATTTATCAGAAAGGCAGAGTTCATTATTGACAGAACAGGTGAGCCCTCGCTCCCAAGGCTCAAGGTCAACTGGGGGAATTGCTTCCAGTGCTAGTGGAGATGAAGGTACAAAGCGAAGGAGAGTTTCTTCAGCAAAGCAAACAGCTGAAAGCTCAACATCTGGCAATGAAACCCCGACAGCTTTTCCATGTCTTGTTGCACTTAATCCGGGCATAAGAATAACAACTGTTGCTGCTGGTGGACGTCATACCTTAGCACTGTCAGATATGGGACAGGTGTGGGGTTGGGGCTATGGAGGAGAAGGGCAGCTTGGCTTAGGCTCCAGAATACGAATGGTGTCCTCTCCTCATCTTGTTCCTTGCATTAATTCTTCTACATATGGAAAAGATAGATTTGCTGCGCTTGCTCAAGGAAGCATGAATTCCGGGGGACAGAATTTTAGAGTTCCTGGGAATTATGTGATGGGAATTGCTTGTGGAGGTCGGCACAGTGCAGTTATCACAGATGCTGGAGCTTTGCTTACTTTTGGTTGGGGACTATATGGACAGTGTGGGCAAGGAAGTACAGATGATGAGCTAAGCCCGGCGTGCGTATCTTCCTTGTTGGGTATCCGAATAGAGGGAGTTGCTGCAGGACTGTGGCATACGGTCTGTGTATCTGCCGATGGTGATGTATATGCCTTTGGTGGAAATCAGTTTGGCCAGTTGGGAACTGGTGATGATCAAGCTGAGACTATACCAAGGCTACTGGATTCTCCAAGCTTGGAAAATGAGCATGTAAAGACTGTATCCTCTGGGGCTCGCCATACTGCAGTGGTAACAGAGGAAGGGAAAGTATTTTGTTGGGGATGGAACAAGTACGGCCAGCTTGGCCTTGGCGATGTGATTGACAGAAACATCCCTTCTCAAGTCACCATCGAAGGATGTGTACCTAAAAATGTTGCATGTGGCTGGTGGCATACTCTTCTTCTAGCTGAGTCACCCACTTGA 1452 0.4897 MNGIGDEPGGEAAALQGCKVYMWGYLPGALPQRSPLLTPVPVRVPASTGSAGYSWKDVCGGGCGFAMAISDSGKLITWGSTDDLGQSYVTAGKHGEIPEPFPIPTEASIIRAAAGWAHCVAITDGGEVYTWGWKECVPSGKVFGESSTGASLEKDLSERQSSLLTEQVSPRSQGSRSTGGIASSASGDEGTKRRRVSSAKQTAESSTSGNETPTAFPCLVALNPGIRITTVAAGGRHTLALSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSTYGKDRFAALAQGSMNSGGQNFRVPGNYVMGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPACVSSLLGIRIEGVAAGLWHTVCVSADGDVYAFGGNQFGQLGTGDDQAETIPRLLDSPSLENEHVKTVSSGARHTAVVTEEGKVFCWGWNKYGQLGLGDVIDRNIPSQVTIEGCVPKNVACGWWHTLLLAESPT 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01496 483 Gene3D - 197 289 IPR009091 -
Accr3g01496 483 PRINTS Chromosome condensation regulator RCC1 signature 231 247 IPR000408 -
Accr3g01496 483 PRINTS Chromosome condensation regulator RCC1 signature 109 122 IPR000408 -
Accr3g01496 483 PRINTS Chromosome condensation regulator RCC1 signature 366 384 IPR000408 -
Accr3g01496 483 PRINTS Chromosome condensation regulator RCC1 signature 426 447 IPR000408 -
Accr3g01496 483 MobiDBLite consensus disorder prediction 154 185 - -
Accr3g01496 483 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 231 241 IPR000408 -
Accr3g01496 483 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 363 373 IPR000408 -
Accr3g01496 483 Gene3D - 12 151 IPR009091 -
Accr3g01496 483 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 73 125 IPR000408 -
Accr3g01496 483 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 245 324 IPR000408 -
Accr3g01496 483 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 417 427 IPR000408 -
Accr3g01496 483 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 12 134 - -
Accr3g01496 483 MobiDBLite consensus disorder prediction 200 214 - -
Accr3g01496 483 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 325 376 IPR000408 -
Accr3g01496 483 Pfam Regulator of chromosome condensation (RCC1) repeat 430 478 IPR000408 -
Accr3g01496 483 Pfam Regulator of chromosome condensation (RCC1) repeat 376 427 IPR000408 -
Accr3g01496 483 Pfam Regulator of chromosome condensation (RCC1) repeat 325 373 IPR000408 -
Accr3g01496 483 Gene3D - 290 482 IPR009091 -
Accr3g01496 483 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 377 430 IPR000408 -
Accr3g01496 483 MobiDBLite consensus disorder prediction 154 214 - -
Accr3g01496 483 SUPERFAMILY RCC1/BLIP-II 15 481 IPR009091 -
Accr3g01496 483 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 311 321 IPR000408 -
Accr3g01496 483 Pfam Regulator of chromosome condensation (RCC1) repeat 109 133 - -
Accr3g01496 483 Pfam Regulator of chromosome condensation (RCC1) repeat 228 257 - -
Accr3g01496 483 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 431 481 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01496 Accr-Chr3 17500947 17506835 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01496 - - qsa:O6P43_014366 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01496 3 17500947 17506835 Accr3g01496 3 17500947 17506835 CCT
Accr3g01496 3 17500947 17506835 Accr3g01496 3 17500947 17506835 ECH