Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01466 ATGGAAGCTTTATCTGAGAAGACGGAACATTTTCAAAAGAATAAAGATGGGGTTCGCTCCTCTGGGGCCAAAACGGCTAAATCTGAGTCGTTCACCGATTCCAGTGCTGAGTCGAGAGAGACGAGTTCGAGTGCCTCGAGTTCCTTCGATTCAAATGAAGAAGCTGTTAAAGCAAAAGGGTCGTCTTCGCCTACTCCTCTTGGCTGGCCCATTCGTAAGGCTACAGTTTCCAAGTGTAGTAAATCTGATGACAAGGAGAATCAACCTATTTCCCATGAGGACAGCTCAAAATTTAGCAGAATCGGTTCAAAAATGTCGGAGATTGAGATGATGAAGGAAAGGTTTGCAAAATTACTGCTTGGTGAAGATATGTCAGGGTCTGGAAAAGGGGTTTGCACAGCTCTGGCTATTTCAAACGCTATTACTAATCTTTGTGCCACCGTGTTTGGGCAATTATGGAGACTAGAACCTCTGCCTGATGAAAAGAAAGCATTGTGGAGAAGAGAGATGGAGTGGCTTCTTTGTGTTGGTGATCACATTGTTGAATTAATCCCTTCTTGGCAAACTTTTCCAGATGGAAGCAAGCTTGAGGTAATGACTTGCATGCCTAGGTCAGATCTTTTCATTAATCTCCCAGCTCTTCGCAAACTCGATAATATGCTTTTGGAAATATTAGACAGTTTCACGAGTAGAGAGTTTTGGTACGTTGATCAAGGAATTGTGGCTCCAGATGTAGATGGATCTTCCTCTTTTCGAAAGCCATTGCAGAGACAAGAGGAAAAATGGTGGCTTCCTGTGCCTCGCGTTCCTCCTTCAGGTCTAACTGAGAACTCAAGAAAACAATTGAACCACACAAGAGAATGTGCAAACCAAATTCTGAAAGCAGCCATGGCCATCAACGACAATGCTCTAGCTGAAATGGAAGTTCCTGAATCATACCTAGAAGCCCTTCCCAAGAATGGAAGAAGTTGCTTGGGGGATTTCATATACCGTTACATAACATCAGACCAGTTTTCTTCAGAGTGTCTTCTTGATTGCCTCGACCTTTCTAATGAACATGTGGCTCTGGAGATTGCTAACAGAGTGGAAGCTTCAATATATGTATGGCGTAGAAGGGCTCATTCAAAACCCCCACCTAATCCTAGCCGTTCAACAGCAAAATCATCCTGGGAAATGGTGAGGGATTTCATGGCTGATGGAGACAAGAGAGAATTACTAGCAGAAAGAGCTGAAAACTTCCTAGTTTGCTTGAAACAGAGGTTCCCTGGTTTAACTCAAACCACTCTTGACACAAGCAAGATCCAATGCAACAAGGACGTGGGTAAGTCAATTCTGGAGAGCTACTCAAGGGTTTTGGAGAGCATGGCGTTTAACATTCTGGCTCGTATTGATGATTTACTGTACGTGGACGACTTGACGAAACATTCAGAGAGGTTTCCGTTGGTTTCTTCGACGGTTAGTAGTCAGCATCCTCACCAGAAGTTGTCTCGTCCAATGTCGGTGTCTGTCTCAGGCACTCCCCATAAATGTGTCAGGGGCACCAATAGCAGCGTTTCACCGGCACCGCCGATCATTAGTCCGGCAAGAGGGGAGAGAACTCCGTTCATCCACAACAACAACAACATCAAACCTCATCGTCGTGGTTTTGGGGTGAAAAGGGTGTTATCGAATTATCTTGGGGTAGAGACGAAAGCCAAAATATGCAGCAATTCAAGTGAAGTGAATTGTTTGAGCTTAAGCACTGGGAATAGAACAGAAACAGAACAACCAGAACGGCAAAAGGAAGCATCATGTGCTCTGAAAAAATGA 1809 0.4428 MEALSEKTEHFQKNKDGVRSSGAKTAKSESFTDSSAESRETSSSASSSFDSNEEAVKAKGSSSPTPLGWPIRKATVSKCSKSDDKENQPISHEDSSKFSRIGSKMSEIEMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPDEKKALWRREMEWLLCVGDHIVELIPSWQTFPDGSKLEVMTCMPRSDLFINLPALRKLDNMLLEILDSFTSREFWYVDQGIVAPDVDGSSSFRKPLQRQEEKWWLPVPRVPPSGLTENSRKQLNHTRECANQILKAAMAINDNALAEMEVPESYLEALPKNGRSCLGDFIYRYITSDQFSSECLLDCLDLSNEHVALEIANRVEASIYVWRRRAHSKPPPNPSRSTAKSSWEMVRDFMADGDKRELLAERAENFLVCLKQRFPGLTQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNILARIDDLLYVDDLTKHSERFPLVSSTVSSQHPHQKLSRPMSVSVSGTPHKCVRGTNSSVSPAPPIISPARGERTPFIHNNNNIKPHRRGFGVKRVLSNYLGVETKAKICSNSSEVNCLSLSTGNRTETEQPERQKEASCALKK 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01466 602 FunFam Rop guanine nucleotide exchange factor 1 99 339 - -
Accr3g01466 602 MobiDBLite consensus disorder prediction 1 22 - -
Accr3g01466 602 FunFam Rop guanine nucleotide exchange factor 14 340 479 - -
Accr3g01466 602 Gene3D PRONE domain, subdomain 1 100 339 - -
Accr3g01466 602 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 27 536 IPR038937 GO:0005085
Accr3g01466 602 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 106 474 IPR005512 GO:0005085
Accr3g01466 602 Gene3D PRONE domain, subdomain 1 340 480 - -
Accr3g01466 602 MobiDBLite consensus disorder prediction 483 541 - -
Accr3g01466 602 MobiDBLite consensus disorder prediction 580 602 - -
Accr3g01466 602 MobiDBLite consensus disorder prediction 483 522 - -
Accr3g01466 602 MobiDBLite consensus disorder prediction 77 102 - -
Accr3g01466 602 MobiDBLite consensus disorder prediction 1 102 - -
Accr3g01466 602 MobiDBLite consensus disorder prediction 23 59 - -
Accr3g01466 602 MobiDBLite consensus disorder prediction 587 602 - -
Accr3g01466 602 ProSiteProfiles PRONE domain profile. 98 480 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01466 Accr-Chr3 16980382 16982794 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01466 - - gmx:100780972 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01466 3 16980382 16982794 Accr3g01466 3 16980382 16982794 CCT
Accr3g01466 3 16980382 16982794 Accr3g01466 3 16980382 16982794 ECH