Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01448 ATGGACGATCGAAACATGAGGAGAATGAGCACCGGGTTAACCGATGTGGTCCTGGAGCGTGTTATGGCTTTTATTCATGACCCCAAAGATCGGGATGCGGTTTCTCAAGTTTGCCGGCAGTGGTACGAGATGGACTGCTTGACCCGAAAGCATGTGACGATTGCTCTCTGCTACACGACCAACCCGGACCGACTCCGACGGAGATTCCCTTACCTCGAGTCGCTGAAGCTGAAAGGGAAACCAAGGGCGGCGATGTTCAATTTGATTCCGGAGGACTGGGGAGGATATGTGGGGCCTTGGGTTAAAGAGATGGCACAGTATTTTGAATGTTTGAAGTCGCTTCATTTCCGTCGCATGATTGTGAGGGATTCCGATCTTGAGCTTCTTGCGCGGTCACGGGGACACGTGCTTCAAGCTCTTAAACTCGACAAGTGTTCTGGTTTTTCCACAGATGGCCTTTACCATATTGGCCAGTCTTGCAGGGTTTTAAGAGTCTTGTTTTTGGAGGAGAGCCAAATTGTTGAGAATGATGGCGAATGGCTACATGAGCTTGCTTTGAATAATACTGTTCTTGAGGCTCTAAATTTTTACTTGACAGATCTTATCAATATCAGAATTGAGGACCTCGAACTTATAGCAAAAAACTGTCGCAACTTAGTTTCTGTGAAAATTACTGATATTGAGATCCTGAAGCTCGTAAACTTCTTTCGTTCTGCGTCTGCACTAGAGGAATTTTGCGGAGGCTCCTACAGTGAGCAGCCGGAAAAGTACAGTGCTGTGCCATTTCCCCCAAAGCTATGTCGATTGGGTTTGACATATATTGGAAAGAATGAACTTCCAATAGTATTCCCTTTCGCATCCCTTCTTAAAAAGTTGGATCTCCTATATTCGATGTTGGATACAGAGGATCATTGTACATTAATCCAGAAGTGCCCCAACTTGGAAGTCCTTGAGTCAAGGAATGTAATTGGTGATAGAGGACTCGAAGTTCTTGCACAAAGCTGTAAGAGGCTCAAGAGACTCAGGATTGAGCGAGGAGATGATGAACAAGGAATGGAGGATGAAGAAGGTGTTGTTTCTCAGAGAGGGTTGATTGCTCTGTCACAGGGCTGTCCAGAACTTGAATATCTGGCTGCTTATGTATCTGACATTACAAATGCATCCCTGGAACACATTGGAACTCACATGAAAAACCTCACTGATTTCCGCCTCGTCTTGCTAGACCGTGAGGCAACCATAACAGATTTACCTCTTGACAATGGGGTGAGAGCTTTATTAAGAGGCTGTGATAAGCTCAGAAGATTTGCTCTGTATCTTCGCTCCGGGGGCTTGACCGACGTTGGCCTCGCCTACATCGGGCAATACAGCCAAAATGTGAGATGGATGCTTCTGGGTTATGTAGGGGAATCTGATGAAGGGCTTCTGGAGTTCTCAAGGGGCTGCCCTAGCCTTCAAAAGCTTGAAATGAGAGGCTGTTCCTTCAGTGAGTATGCATTAGCTGTTGCCGCCACACGACTGAATTCTCTAAGGTACTTATGGGTGCAAGGGTATAGACAATCTACATATGGGCGTGATCTTTTAGCAATGGCAAGACCCTTTTGGAATATTGAGTTGATTCCTTCTAGGAGAGTTATTGTTACTTATCAAGGTGGAGAATCTGTTGTGGTTGAGCATCCAGCACATATTCTTGCATATTACTCTCTTGCAGGGCCAAGATCAGATTTTCCAGATACTGTTGTTCCCCTGGATCCAACAGCACATGTTGAAGTTTAG 1773 0.4563 MDDRNMRRMSTGLTDVVLERVMAFIHDPKDRDAVSQVCRQWYEMDCLTRKHVTIALCYTTNPDRLRRRFPYLESLKLKGKPRAAMFNLIPEDWGGYVGPWVKEMAQYFECLKSLHFRRMIVRDSDLELLARSRGHVLQALKLDKCSGFSTDGLYHIGQSCRVLRVLFLEESQIVENDGEWLHELALNNTVLEALNFYLTDLINIRIEDLELIAKNCRNLVSVKITDIEILKLVNFFRSASALEEFCGGSYSEQPEKYSAVPFPPKLCRLGLTYIGKNELPIVFPFASLLKKLDLLYSMLDTEDHCTLIQKCPNLEVLESRNVIGDRGLEVLAQSCKRLKRLRIERGDDEQGMEDEEGVVSQRGLIALSQGCPELEYLAAYVSDITNASLEHIGTHMKNLTDFRLVLLDREATITDLPLDNGVRALLRGCDKLRRFALYLRSGGLTDVGLAYIGQYSQNVRWMLLGYVGESDEGLLEFSRGCPSLQKLEMRGCSFSEYALAVAATRLNSLRYLWVQGYRQSTYGRDLLAMARPFWNIELIPSRRVIVTYQGGESVVVEHPAHILAYYSLAGPRSDFPDTVVPLDPTAHVEV 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01448 590 SUPERFAMILY RNI-like 110 524 - -
Accr3g01448 590 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 13 245 - -
Accr3g01448 590 Pfam F-box 11 51 IPR041567 -
Accr3g01448 590 Gene3D Ribonuclease Inhibitor 50 586 IPR032675 -
Accr3g01448 590 FunFam Coronatine-insensitive protein 1 50 585 - -
Accr3g01448 590 Pfam Transport inhibitor response 1 protein domain 70 116 IPR041101 -
Accr3g01448 590 Gene3D - 1 49 - -
Accr3g01448 590 SMART LRR_CC_2 134 159 IPR006553 -
Accr3g01448 590 SMART LRR_CC_2 429 455 IPR006553 -
Accr3g01448 590 SMART LRR_CC_2 371 395 IPR006553 -
Accr3g01448 590 SMART LRR_CC_2 311 334 IPR006553 -
Accr3g01448 590 SMART LRR_CC_2 481 505 IPR006553 -
Accr3g01448 590 CDD F-box_AtTIR1-like 13 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01448 Accr-Chr3 16735851 16739910 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01448 K13463 - gmx:100793081 998.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01448 3 16735851 16739910 Accr3g01448 3 16735851 16739910 CCT
Accr3g01448 3 16735851 16739910 Accr3g01448 3 16735851 16739910 ECH