Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01414 ATGGGTTCTTCCAAAGAAGACAGATTCACGAGGATATTGAGGGGTTTCAAGACTCTGTTCTTCTTGATCACCATGATCATATCGCTTTTGCTCTTCTCTGCTCCGATTCTTCTTGTTCTCGCCGATGCCCTTCTTCCTTCTGCTCTTCTCTCCGCTCTCTCGCCTTCCCCTCTCTCTCTAGAATCTCTCTCTTCCCACCTCCAAAACTACGATTTCCGATACTCCCTCATCGATATCCCCCTCGTTTCTATCATAAGATCCCTTGTCATCTTCTGTGTTTATAGTTTCTGCGATGGGCCAAGGCTTTATCGGGGACCATATTTGGGCATAACGACGATGTGCTCTGTTTCGTCTCTGATTTTTGTGTCTATGAAAGCTGTGTACGTTTTCAGCCTCCCAAATTCGTATCGAGGAAGCGGCCATGTGAGAGCCTTCGAGATAGCTCTGTTCGTGTGTTCGTGTGCTCTGGCTATTGGGCATATTGCCGTAGCTTATAGAACAAGTTGCAGAGAAAGACGAAAGCTTCTGGTGTACAAAATTGACGTTGAAGCTGTTTCAGCTTGCAAGAGGTACCCCAAGATAAGTCTTAAAGAAGAACGAATCAAGTGA 609 0.4581 MGSSKEDRFTRILRGFKTLFFLITMIISLLLFSAPILLVLADALLPSALLSALSPSPLSLESLSSHLQNYDFRYSLIDIPLVSIIRSLVIFCVYSFCDGPRLYRGPYLGITTMCSVSSLIFVSMKAVYVFSLPNSYRGSGHVRAFEIALFVCSCALAIGHIAVAYRTSCRERRKLLVYKIDVEAVSACKRYPKISLKEERIK 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01414 202 Pfam Cholesterol-capturing domain 61 156 IPR019498 -
Accr3g01414 202 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 1 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01414 Accr-Chr3 16145640 16148043 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01414 14 189 Miscellaneous Gene Families AT1G80280 42.246 1.69e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01414 - - gmx:100811069 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01414 3 16145640 16148043 Accr3g01414 3 16145640 16148043 CCT
Accr3g01414 3 16145640 16148043 Accr3g01414 3 16145640 16148043 ECH