Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01407 ATGTCACTCGCTCCTATCAACGATTCTTCTTCAAAGGAAGAAGAAGAGGACATGAAGCCCTATAACAATTACAAGTTGGTCGTCATCAACAGAAAGTACAAGAGCAACGATCTGGTTCCACCTCGGGACCTCAAGGAGACCTTCTGCAAGTTCGCCGGCGGCGGCGGGTCCCGCATGTCCGTCGATCAGTTCCGGTGCTTCCTGGTGGAGCACCAAGGCCACGTCGACATCACCCTGTCGGAATCGGAGCAAATCGTCAACAAGATCCTCAAAGCGCGAAATGGGAGCAATGACGAAGCTCATTGGAGTGCCGGCGACGATCACCGTACTAAACAACAACGTGAACTCACTCTCGATGTCGTCTTCCATTTTCTTCTTCTCAATGATTTCAACGATCCTCTGAAATCTGAGGTTCATCATGATATGGAAGCTCCATTGTCACACTATTTCATATACACAGGCCATAATTCGTATCTTACTGGGAATCAATTTAGCAGTGAATGTAGTGAAGAACCCGTCATTCAGGCTCTGCAACAAGGCGTGAGGGTCATTGAACTAGATTTATGGCCTACTTCCAATAAAGATGATATTAAAGTTGTTCATGGACGGACACTTACCACTCCTGTTTCACCCAGAAAATGTCTGGAGGCCATAAAGAAATATGCCTTTTTTAAATCTGAGTACCCAGTTATTATAACCATTGAAGACCACCTTACAAGAGATCTTCGAACTAAATTTGCAGAGATGGCTACTGAAATATTAGGAGATTTGCTATATTATCCTCAGGCAGAGCGTTTGACAGAATTCCCATCACCAAAATCATTGAAAAATAAAATAATTATATCCACCAAACCTCCAAAAGAACATCTTAATAAAAGCATTGATGTGGATAGAGGTAGTAACAATGATGTGCAGGATGGAAGTGAATCATCTGAAGAAGAAACATCATCGGGACAAGAGTCGCCGGATGCCATGGCTAAACCAGAAACTGAGGACAAAATGGCTGATCCAGAGACCGAGAAGAAAGAAGAGGGAGATTCAAATGCAGGTGATCAAAATGGGTTTAATCAACAGTGTTCAGCTGATTATAAACGCTTAATCGGAATCCCTGCGAAGAACATAAAGGGTAGCATAAAGGATAAATTGAGGATTGAAGAGGAAGTTAGACGCCTGAGTTGGAGTGAGCTGAAACTTGAAGAGGCTTCTGAATCTCATGGAACTGATATTATAAGGTTCACACAAAGAAACATCCTCAGGGTATACCCAAAAGGAACACGCGTCCAATCCTCGAATTTCAAGCCGCATATTGGCTGGATGTATGGAGTTCAAATGGTGGCATTCAATATGCAGAAGCATGGGAAGGAGCTATGGTTGATGCAGGGAATGTTCAGGGCAAATGGAGGGTGTGGTTATGTGAAAAAACCTGAAATGGTAATGCAGAATCGTCCAAATGGGGAACTGTTTGATCCTGAAAGAACATTGCCTGAGGGAAAGACAATATTAAAGGTAAATGTGTACATGGGACATGGCTGGAGCTCAGAATTCAGTCCCACCCACTTTGACAGGTTCTCTCCACCAGACTTCTACACAAAGGTCAGTATTGATGGAGTGCCAGCTGATTGTGCTGAGAAGCAAACAAGTGTAATAAAGGATAACTGGCTTCCTGTTTGGGAAGAGGAATTCAGATTCCCCTTAACCATGCCGGAGCTCGCGTTGCTTCAGATAATAGTGAGGGAGAAAGATCAGGGAGGAAAGGATGACTTTGGTGGGCAGACATGTTTACCAGTCTCAGAGCTAAGAGTTGGATTTAGATCAGTCCCTTTGTATGACAAAAAGGGAGAGAAATATAAATCTGTTAAGCTTTTCATGCAGTTTCAGTTCATCGACCCAAAAAATGCAGGGTCAGTTGAATGA 1914 0.4336 MSLAPINDSSSKEEEEDMKPYNNYKLVVINRKYKSNDLVPPRDLKETFCKFAGGGGSRMSVDQFRCFLVEHQGHVDITLSESEQIVNKILKARNGSNDEAHWSAGDDHRTKQQRELTLDVVFHFLLLNDFNDPLKSEVHHDMEAPLSHYFIYTGHNSYLTGNQFSSECSEEPVIQALQQGVRVIELDLWPTSNKDDIKVVHGRTLTTPVSPRKCLEAIKKYAFFKSEYPVIITIEDHLTRDLRTKFAEMATEILGDLLYYPQAERLTEFPSPKSLKNKIIISTKPPKEHLNKSIDVDRGSNNDVQDGSESSEEETSSGQESPDAMAKPETEDKMADPETEKKEEGDSNAGDQNGFNQQCSADYKRLIGIPAKNIKGSIKDKLRIEEEVRRLSWSELKLEEASESHGTDIIRFTQRNILRVYPKGTRVQSSNFKPHIGWMYGVQMVAFNMQKHGKELWLMQGMFRANGGCGYVKKPEMVMQNRPNGELFDPERTLPEGKTILKVNVYMGHGWSSEFSPTHFDRFSPPDFYTKVSIDGVPADCAEKQTSVIKDNWLPVWEEEFRFPLTMPELALLQIIVREKDQGGKDDFGGQTCLPVSELRVGFRSVPLYDKKGEKYKSVKLFMQFQFIDPKNAGSVE 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01407 637 CDD C2_PLC_like 498 627 - -
Accr3g01407 637 Gene3D C2 domain 497 636 IPR035892 -
Accr3g01407 637 SUPERFAMILY EF-hand 37 93 IPR011992 -
Accr3g01407 637 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 500 628 IPR035892 -
Accr3g01407 637 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 17 627 IPR001192 GO:0035556
Accr3g01407 637 SUPERFAMILY PLC-like phosphodiesterases 140 480 IPR017946 GO:0006629|GO:0008081
Accr3g01407 637 Gene3D - 36 135 - -
Accr3g01407 637 Gene3D Phosphatidylinositol (PI) phosphodiesterase 136 491 IPR017946 GO:0006629|GO:0008081
Accr3g01407 637 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 140 284 - -
Accr3g01407 637 Pfam C2 domain 501 599 IPR000008 -
Accr3g01407 637 SMART plcy_3 363 479 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Accr3g01407 637 ProSiteProfiles C2 domain profile. 482 610 IPR000008 -
Accr3g01407 637 MobiDBLite consensus disorder prediction 282 296 - -
Accr3g01407 637 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 392 478 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Accr3g01407 637 FunFam Phosphoinositide phospholipase C 495 628 - -
Accr3g01407 637 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 390 476 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Accr3g01407 637 PRINTS Phospholipase C signature 268 285 IPR001192 GO:0035556
Accr3g01407 637 PRINTS Phospholipase C signature 171 191 IPR001192 GO:0035556
Accr3g01407 637 PRINTS Phospholipase C signature 145 163 IPR001192 GO:0035556
Accr3g01407 637 PRINTS Phospholipase C signature 417 438 IPR001192 GO:0035556
Accr3g01407 637 PRINTS Phospholipase C signature 594 604 IPR001192 GO:0035556
Accr3g01407 637 PRINTS Phospholipase C signature 438 456 IPR001192 GO:0035556
Accr3g01407 637 SMART plcx_3 140 284 IPR000909 -
Accr3g01407 637 MobiDBLite consensus disorder prediction 297 323 - -
Accr3g01407 637 SMART C2_3c 500 608 IPR000008 -
Accr3g01407 637 Pfam Phosphatidylinositol-specific phospholipase C, X domain 142 284 IPR000909 -
Accr3g01407 637 MobiDBLite consensus disorder prediction 280 356 - -
Accr3g01407 637 MobiDBLite consensus disorder prediction 325 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01407 Accr-Chr3 16048377 16053180 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01407 17 627 Acyl Lipid Metabolism Gene Families AT2G40116 53.503 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01407 K05857 - gmx:100820253 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01407 3 16048377 16053180 Accr3g01407 3 16048377 16053180 CCT
Accr3g01407 3 16048377 16053180 Accr3g01407 3 16048377 16053180 ECH