Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01405 ATGGCGGGAACCCACAACTACAAAATATTCAAGTGCTTCAACCTTAAGTTCACTGTCTCCGAGCCGGGCCCACCCGACGACGTCAAGTACATCTTTTACAAGTTTTCCTCCGGCGGTGATCACTTGTCTGCCGATCAACTAGGCCTTTTCCTGGAGAAGCACCAGGGTGAATCGGACTTGACCTCCTCGGATTTCACCCAAATTGTTGAGAAGATCCTGCAATTGCGGAATCAGAATGAGGAGAATGAATCTATCGAAAAAAAGAATGAGGAGATTGAAACTTCTACGGAGGCCGCGAGCTCCATTGAGGGTATCAGTCTCGACGAATTCTTCCATTTTCTACTCCTCAATGATTTCAATGCCCCCTTAAAATCCCAAGTGCATCATGATATGAATGCTCCGCTGTCACATTATTTCATATATACAGGACACAATTCTTATCTCACTGGAAATCAACTGAGCAGTGATTGTAGTGATGTGCCAATTATAAAGTCTTTGCTTGATGGTGTGCGAGTAATTGAACTAGATTTATGGCCAAATTCAACTCGAGACGATGTTATTGTAGTTCATGGAAGGACTCTTACCTCTCCCGTTGCACTCATTCAATGTTTGAAGTCGATAAAAGAGTATGCATTTGTTAAATCTCATTACCCCGTCATTATAACTCTAGAAGACCATCTCCCAACAGATCTTCAAGCTAACGTTGCTGAGATGGTAACAGAAATATTTGGAGAAGCCCTTTACTATCCCGAGACAGATGGAATGGCAGAATTCCCCTCACCAGAATCATTGAAAGGTCGAATTCTTATATCAACCAAACCACCAAAAGAGTATCTTGAATCTGAATGTTCATCGCCAACCGGTCAAATGGATGAACCAGAAACTGATAGCAAGGATGAAAGTGATGAAGAAGTGGAAGATTTGAATGCAAGTGAAGAAAAATCACTCCAGCAATGTGCACCTGAATATGGGCGCTTAATCACAATCCATGCTGGGAAACCTAAGGGTCAAGCAAAGGATTATTTAAGTGTTGTCGGTAATGTCGGACGCCTAAGCATGTGTGAACAGAGGCTTCTAAAGACTAGTGCATCTCATGGAGATGAAGTTATTAGGTTCACTCAGAAGAATATTCTCAGGATTTTCCCAAAAGGAACACGTGTGTCTTCCTCAAATTTCAGACCACATATTGGGTGGAATTATGGAGCTCAGATGGTTGCATTCAACATGCAGGGGTATGGCAGATCACTATGGTTCATGCAAGGGATGTTTAGAGGAAATGGAGGCTGTGGTTATGTGAAAAAACCCGATTGCTTATTGTCGAGAGGTCCCCACGGTGAGGTTTTCAATCCTACCAGAGCATTACCAGTGAAGACAACATTAAAGGTTAAAGTATATCTAGGGACTGGATGGAGCTCAGATTTCAGCCAAACACACTTTGATTCATACTCTCCACCTGACTTCTACACAAAGGTTTGTATTGTTGGGGTAGATAATGATAAAGTCAAGAAGAAAACAAAGGTAATAGATGATGATTGGTTCCCCGTTTGGGATGAAGGGTTTGAGTTCCCTTTGACTGTTCCAGAGTTGGCTTTACTGAGGATAGAAGTTCGAGAGTATGATAGGCATGAATCGGATGACTTTGGTGGGCAGACGTGTTTGCCGGTTTTTGAGCTAAGACCTGGATTCCGATCAGTCCCCCTATATGACAAAAAGGGCAGCCAACTCAAGTCTGTGAGGCTTTTCATGCATTTTGTCTTCGTTTCATGCTAG 1770 0.4271 MAGTHNYKIFKCFNLKFTVSEPGPPDDVKYIFYKFSSGGDHLSADQLGLFLEKHQGESDLTSSDFTQIVEKILQLRNQNEENESIEKKNEEIETSTEAASSIEGISLDEFFHFLLLNDFNAPLKSQVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKSLLDGVRVIELDLWPNSTRDDVIVVHGRTLTSPVALIQCLKSIKEYAFVKSHYPVIITLEDHLPTDLQANVAEMVTEIFGEALYYPETDGMAEFPSPESLKGRILISTKPPKEYLESECSSPTGQMDEPETDSKDESDEEVEDLNASEEKSLQQCAPEYGRLITIHAGKPKGQAKDYLSVVGNVGRLSMCEQRLLKTSASHGDEVIRFTQKNILRIFPKGTRVSSSNFRPHIGWNYGAQMVAFNMQGYGRSLWFMQGMFRGNGGCGYVKKPDCLLSRGPHGEVFNPTRALPVKTTLKVKVYLGTGWSSDFSQTHFDSYSPPDFYTKVCIVGVDNDKVKKKTKVIDDDWFPVWDEGFEFPLTVPELALLRIEVREYDRHESDDFGGQTCLPVFELRPGFRSVPLYDKKGSQLKSVRLFMHFVFVSC 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01405 589 SUPERFAMILY PLC-like phosphodiesterases 129 440 IPR017946 GO:0006629|GO:0008081
Accr3g01405 589 Coils Coil 68 95 - -
Accr3g01405 589 SUPERFAMILY EF-hand 7 131 IPR011992 -
Accr3g01405 589 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 352 438 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Accr3g01405 589 CDD C2_PLC_like 457 584 - -
Accr3g01405 589 SMART C2_3c 459 567 IPR000008 -
Accr3g01405 589 PRINTS Phospholipase C signature 398 416 IPR001192 GO:0035556
Accr3g01405 589 PRINTS Phospholipase C signature 134 152 IPR001192 GO:0035556
Accr3g01405 589 PRINTS Phospholipase C signature 553 563 IPR001192 GO:0035556
Accr3g01405 589 PRINTS Phospholipase C signature 257 274 IPR001192 GO:0035556
Accr3g01405 589 PRINTS Phospholipase C signature 377 398 IPR001192 GO:0035556
Accr3g01405 589 PRINTS Phospholipase C signature 160 180 IPR001192 GO:0035556
Accr3g01405 589 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 10 586 IPR001192 GO:0035556
Accr3g01405 589 Gene3D - 24 124 - -
Accr3g01405 589 Pfam Phosphatidylinositol-specific phospholipase C, X domain 131 273 IPR000909 -
Accr3g01405 589 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 459 586 IPR035892 -
Accr3g01405 589 Gene3D Phosphatidylinositol (PI) phosphodiesterase 125 451 IPR017946 GO:0006629|GO:0008081
Accr3g01405 589 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 129 273 - -
Accr3g01405 589 Pfam C2 domain 460 558 IPR000008 -
Accr3g01405 589 FunFam Phosphoinositide phospholipase C 454 587 - -
Accr3g01405 589 MobiDBLite consensus disorder prediction 277 315 - -
Accr3g01405 589 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 352 437 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Accr3g01405 589 Gene3D C2 domain 454 588 IPR035892 -
Accr3g01405 589 ProSiteProfiles C2 domain profile. 440 569 IPR000008 -
Accr3g01405 589 SMART plcx_3 129 273 IPR000909 -
Accr3g01405 589 SMART plcy_3 323 439 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Accr3g01405 589 FunFam Phosphoinositide phospholipase C 126 452 - -
Accr3g01405 589 MobiDBLite consensus disorder prediction 295 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01405 Accr-Chr3 16032506 16036859 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01405 2 586 Acyl Lipid Metabolism Gene Families AT2G40116 56.891 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01405 K05857 - gmx:100777010 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01405 3 16032506 16036859 Accr3g01405 3 16032506 16036859 CCT
Accr3g01405 3 16032506 16036859 Accr3g01405 3 16032506 16036859 ECH