Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01403 ATGTCCAAACAGACTTACAGAGTCTGCTTCTGCTTCCGCCGGAGGTTCAGGCTTCGCGCCTCCGAGGCACCGCCGGAGATCAAGTCGCTTTTTGATCGCTACTCTGAGAATGGTTTTATGACTGCTGCTCACCTCCAGAGGTTCTTGATTGACGTTCAGAAGGAACATAAAGCCACCGAAGATGACGCCCATGCCATCATCGACGGCCTCAAGCATTTGAACATCTTTCATCGAACTGATCGAAGGGGTCTCGCTCTTGACGGTTTCTTCAAGTACCTCTTCAGTGACCAAAATCAACCTCTCTCGCCTTCTCTTGGGATACACCATGATATGACGGCACCGTTGTCTCATTATTTCATATTCACTGGTCACAATTCCTATCTCACTGGAAATCAGCTTAGTAGCGATTGCAGTGACGTCCCCATTATGCATGCCCTGCAAAGAGGTGTAAGAGTGATAGAACTGGACATATGGCCTGATCCTTCAAAGGACGATGTGCATGTTCTTCATGGAAGGACGCTGACTTCTCCTGTAGAGCTTAGCAAATGCCTGAGGTGCATTAAGGAATATGCCTTTTCTGCGTCTGAATATCCGGTTGTAATAACTTTAGAAGACCATCTTACTCCAGATCTGCAGGCTAAAGTGGCTGAGATGGTCACTCAAACGTTTGGAGAAATTCTATTTTCACCTGGCACGGAATGCCTGAAGGAATTTCCTTCTCCAGAATCACTTAAAAGGAGGATTATTATATCAACCAAACCGCCTAAGGAATACCTTGAGGCTAAAGAAGTAAAGGAAAAGGGGGACGAGCCACTGAAGTCAAAGGCCTCAGGTGATGAAGAAGCTTGGGGGAAGGAAGTCCCAGGCTTGAAATGTGGCACTTTAGCTGATGACAAGAACATTGTGTATGAAAAACTTATTGAAGAGGAGGATCATGATGAAGCAGATAAGTTACATCATAACGGAGCTCCTGAATATAGGCGTTTAATTGCCATTCATGCTGGCAAACCCAAAGGTGGAATAGACGAATGTCTGAAAGTGGATCCTGATAAAGTGCGACGTCTAAGCTTAAGTGAGCAAGAGCTTGAGAAGATTTCCGCAACCCATGGAAAAGAAATTGTCAGGTTTACTCAGCGTAATATCCTGAGGGTGTATCCAAAAGGCACACGCATTGACTCATCCAATTATAACCCACTAATTGGGTGGGTGCATGGAGCTCAAATGGTTGCATTTAACATGCAGGGGTATGGGAGATCACTTTGGGTGATGCAAGGCATGTTCAAAGCCAATGGTGGATGTGGTTATGTTAAAAAACCAGATTTCCTACTGAAGCCTTTCCCGAATAATGAGGTCTTTGATCCTAAAGCCAAGTTAACTGTTAAGACTACATTGAAGGTGACCGTATACATGGGAGAAGGATGGTCTAATGATTTCAAGCCAACCCACTTTGATCAATTCTCACCTCCGGACTTCTACGCAAGAGTGGGAATAGCAGGTGTACCAGCCGATACTGTGATGAAGAGAACAAAAGCAATAGAGGACAATTGGTTTCCTACATGGAACGAGACATTCGAATTGCCTCTTACAGTTCCTGAACTGGCAGTGCTTCGCATAGAAGTTCATGAGTACGATATGTCTGAAAAAGATGACTTTGGTGGCCAAACATGCCTTCCTGTTCCAGAGCTCAGAAGTGGAATTCGAGCAGTTTCACTACATGACCGCATGGGGGAGAAGTACAACTCTGTGAAGCTCCTTATGCGCTTTGAGTTTCTTTGA 1776 0.4505 MSKQTYRVCFCFRRRFRLRASEAPPEIKSLFDRYSENGFMTAAHLQRFLIDVQKEHKATEDDAHAIIDGLKHLNIFHRTDRRGLALDGFFKYLFSDQNQPLSPSLGIHHDMTAPLSHYFIFTGHNSYLTGNQLSSDCSDVPIMHALQRGVRVIELDIWPDPSKDDVHVLHGRTLTSPVELSKCLRCIKEYAFSASEYPVVITLEDHLTPDLQAKVAEMVTQTFGEILFSPGTECLKEFPSPESLKRRIIISTKPPKEYLEAKEVKEKGDEPLKSKASGDEEAWGKEVPGLKCGTLADDKNIVYEKLIEEEDHDEADKLHHNGAPEYRRLIAIHAGKPKGGIDECLKVDPDKVRRLSLSEQELEKISATHGKEIVRFTQRNILRVYPKGTRIDSSNYNPLIGWVHGAQMVAFNMQGYGRSLWVMQGMFKANGGCGYVKKPDFLLKPFPNNEVFDPKAKLTVKTTLKVTVYMGEGWSNDFKPTHFDQFSPPDFYARVGIAGVPADTVMKRTKAIEDNWFPTWNETFELPLTVPELAVLRIEVHEYDMSEKDDFGGQTCLPVPELRSGIRAVSLHDRMGEKYNSVKLLMRFEFL 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01403 591 PRINTS Phospholipase C signature 237 254 IPR001192 GO:0035556
Accr3g01403 591 PRINTS Phospholipase C signature 557 567 IPR001192 GO:0035556
Accr3g01403 591 PRINTS Phospholipase C signature 381 402 IPR001192 GO:0035556
Accr3g01403 591 PRINTS Phospholipase C signature 140 160 IPR001192 GO:0035556
Accr3g01403 591 PRINTS Phospholipase C signature 402 420 IPR001192 GO:0035556
Accr3g01403 591 PRINTS Phospholipase C signature 114 132 IPR001192 GO:0035556
Accr3g01403 591 CDD C2_PLC_like 461 590 - -
Accr3g01403 591 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 355 441 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Accr3g01403 591 SMART plcx_3 109 253 IPR000909 -
Accr3g01403 591 Gene3D Phosphatidylinositol (PI) phosphodiesterase 106 456 IPR017946 GO:0006629|GO:0008081
Accr3g01403 591 Pfam Phosphoinositide-specific phospholipase C, efhand-like 26 98 IPR015359 -
Accr3g01403 591 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 356 442 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Accr3g01403 591 Pfam C2 domain 463 565 IPR000008 -
Accr3g01403 591 FunFam Phosphoinositide phospholipase C 458 591 - -
Accr3g01403 591 Pfam Phosphatidylinositol-specific phospholipase C, X domain 111 253 IPR000909 -
Accr3g01403 591 ProSiteProfiles C2 domain profile. 443 573 IPR000008 -
Accr3g01403 591 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 463 590 IPR035892 -
Accr3g01403 591 SUPERFAMILY PLC-like phosphodiesterases 109 444 IPR017946 GO:0006629|GO:0008081
Accr3g01403 591 Gene3D - 22 104 - -
Accr3g01403 591 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 9 590 IPR001192 GO:0035556
Accr3g01403 591 SMART plcy_3 326 443 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Accr3g01403 591 SMART C2_3c 463 571 IPR000008 -
Accr3g01403 591 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 109 253 - -
Accr3g01403 591 Gene3D C2 domain 457 591 IPR035892 -
Accr3g01403 591 SUPERFAMILY EF-hand 23 103 IPR011992 -
Accr3g01403 591 CDD PI-PLCc_plant 108 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01403 Accr-Chr3 15937382 15941937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01403 1 591 Acyl Lipid Metabolism Gene Families AT3G55940 67.672 0.0 802
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01403 K05857 - qsa:O6P43_013858 947.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01403 3 15937382 15941937 Accr3g01403 3 15937382 15941937 CCT
Accr3g01403 3 15937382 15941937 Accr3g01403 3 15937382 15941937 ECH