Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01380 ATGGCAAACTCAGAAGAAGAAAAGCAACTTCCATATCCTCCAATCCCTAAAGATGGCTACAATACGCAGAATTTTTCCTCCAATGACGACGATGAAGAAAACGACTCTGAGGAAGATGAAGAAAGCAACGAACGGGATCCTCCTGCTCGAGTCCATGATGTGCTAATAAGGGGGAATACGAAAACCAAGGATTGGGTGATCGAGGCCGAGGTGGAGGAGATAAAGAACGCCACAACTATGCTAGAGCTGGTAGAAGCGGCCAAAATTGCCAATGCGAAGCTTCGTAGCCTCCAGATTTTTGATGCGGTCATTATTAAGCTTGTGCCAGGACCGCCAGAGTTGGCTGGTACTGCCAATGTTATCATTGAGGTCTCAGAAGCCGATAGCAAACCTTCTGGTGAAGTCGGTGTTTTCTCAAAACCCTCGGCTAATTCTTGGTCTCTTGAAGGTGCTCTAAAGTTCAAAAACTTGTTTGGCTACGGTGATCTATGGGATGGTTCTCTAGCATATGGTCCCAATCAATCTTCAGACTTGAGTGTTGGGGTGTTTGTGCCTCGATTGAAAGGATTATTGACCCCTGTTGTGGCACGAGCATTCATGCATTCCCAAGATTGGCAAGAGTATTCTTCATACAAAGAGCGATCATCTGGCATATCTCTTGGCTTATTCTCAACAAAGCACCATGACTTAGCATACAATCTTGCGTGGCGTACCATAACAGATCCATCACAAATGGCATCCAGATCAATTAGGAGGCAGATTGGACATGGTTTATTGTCATCTTTGAAATATACATTTAAGATTGACCAGAGGGACTCATCAGTTAGGCCTACAAAAGGATACGCTTTTCTTTCTACAACTCAATTTGGTGGCCTTACACCAGATCACAGGAGCTTGCAGTTTCTGCGTCAGGAGTTTGATGTTCGATATGCCATTCCTCTTGGGTTTTTTCATACTGCTCTCAACCTTGGGATCTCTGCTGGTGTCATTTTTCCATGGGGACATGGGTTCTTGAACAAGCCTTCTCCCCTGCCCGAAAGGTTTTTCTTGGGTGGTGATTTCTCTCCAGTTTGCAGCCTAGGAGGGCCAACAACATTATGGGGATTCAGGACAAGGGCACTAGGCCCTACTGAACCACGAAGACAAAATAGAAATGCAACAAATAATGACAACGTCAATTCCCCTAGAAGGGACTTCGTTGGAGGAGACCTTGCCGTTACTGCTTTTGCAGACCTCTCTTTTGATCTTCCAATCGGCTGGTTAAGAGAACGTGGAATCCATGGACATGTTTTTGCTGGTGTTGGGAATATTGCCAAGTTAGCTGAGAATGAGTACAGGAAGTTCTCTCCTAAAATTTTTTTGGATTCATTTCGAACTTCTGTGGGATGTGGAATTGTTATTCCAAATAAACTCATTCGCCTAGAGGGTAACTTCTACTACATACTCAGGCAGCATGAGCATGATTGTGGAGAGACTGGTTTTAGGTTTAGCTTTTCGCTTCCTTCATAG 1509 0.4453 MANSEEEKQLPYPPIPKDGYNTQNFSSNDDDEENDSEEDEESNERDPPARVHDVLIRGNTKTKDWVIEAEVEEIKNATTMLELVEAAKIANAKLRSLQIFDAVIIKLVPGPPELAGTANVIIEVSEADSKPSGEVGVFSKPSANSWSLEGALKFKNLFGYGDLWDGSLAYGPNQSSDLSVGVFVPRLKGLLTPVVARAFMHSQDWQEYSSYKERSSGISLGLFSTKHHDLAYNLAWRTITDPSQMASRSIRRQIGHGLLSSLKYTFKIDQRDSSVRPTKGYAFLSTTQFGGLTPDHRSLQFLRQEFDVRYAIPLGFFHTALNLGISAGVIFPWGHGFLNKPSPLPERFFLGGDFSPVCSLGGPTTLWGFRTRALGPTEPRRQNRNATNNDNVNSPRRDFVGGDLAVTAFADLSFDLPIGWLRERGIHGHVFAGVGNIAKLAENEYRKFSPKIFLDSFRTSVGCGIVIPNKLIRLEGNFYYILRQHEHDCGETGFRFSFSLPS 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01380 502 Coils Coil 67 87 - -
Accr3g01380 502 MobiDBLite consensus disorder prediction 1 53 - -
Accr3g01380 502 MobiDBLite consensus disorder prediction 378 395 - -
Accr3g01380 502 Gene3D membrane protein fhac 47 127 - -
Accr3g01380 502 FunFam Outer membrane OMP85 family protein 48 127 - -
Accr3g01380 502 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 141 500 - -
Accr3g01380 502 Pfam Omp85 superfamily domain 156 499 IPR000184 GO:0019867
Accr3g01380 502 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 23 499 IPR039910 -
Accr3g01380 502 MobiDBLite consensus disorder prediction 28 42 - -
Accr3g01380 502 MobiDBLite consensus disorder prediction 374 395 - -
Accr3g01380 502 FunFam Outer membrane OMP85 family protein 138 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01380 Accr-Chr3 15553958 15561559 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01380 K07277 - gmx:100802876 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01380 3 15553958 15561559 Accr3g01380 3 15553958 15561559 CCT
Accr3g01380 3 15553958 15561559 Accr3g01380 3 15553958 15561559 ECH