Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01378 ATGGCTAGCCAAGACCTCTCCTCTTCCTTAGTCACCGACATCGAGACCTACTCTGGCAAAGACCCTCTTCTTCCGTGGCTCCGAGGGATTCGGAAGATGAAGGACACTCTGCCTCCTGCGGCCCTCAATGAGAAGCTGCCGAAGTTCTTACAGAAATGTGCGCAGACTTTTGAGACCGATCGGCGCTACCGAAACGACATGCGGTATCTTCGGATTTGGCTGCACTTGATGGATTTTGTAGATGACCCATTGTCGCTTTTGAAAACCATGGAGGTTAATCATATTGGGACAAAACGCTGTCAGTTCTACCAAGCATATGCTCTTTACTATGAAAAGAAGAAGAGATATGAGGAGGCTGAGAAAATGTACCATTTGGGAGTGAAAAACCTTGCAGAACCTTTGGATGACTTGCAAAAATCATATGAACAATTTCTTGGTCGCATGGAAAGAAAGAAAAACAAAAAAATCCAGCAGCAGGAAGGGAGAGCCTCCAGGAGGCCTCTGTCTACAAAGAATATGCCGCCTCATTTCAACAAAACCGAGGGGAAAAGTGAAGCAAGTGGCATTGAGAGTGGTCATGTAGGACCTCAAATTGCTAGTTCTGTGGGTAAAGACCTTTCTGATGAAAGACTTGTAGAGACTAAAAAGGATCAGGGCAGGAGGTTTTGTGATGAACCCACAGTTGTTGGTAAGTTTGTTGGCACTGCCCTTGTAGGAAGGTCTGAAGCCGAAAATGCCTGTCATCATGGACTGCTTGATCCTACAATAAATATGAAGGAAGCAATGAATGCCATTAATAGTATGTTCCAAGAGCCACTGGAGGATGTTTCTATAGCCAAGAAATCACACAAAGACCGATCGAAGGAAGATCACTTTGCACAAAAGGGATTAGAGGTTTTCATTGATGAAAGCTCCGATAAAATCAAACCATCAGCTTCTTCATCTCTGCGTCACAATACTGAAGCAGGTCAATCTCATCAAGAGCCACTTCAAATATACATTGATGATGAAGGATGTAGTGAAACTAGTGACATAAACGATGAACAGAGAGATGTCCAGAATTTGTCAGGAGATTTTACCTCCTCAGCTTCTCGATTGGATGCTTTTGTTTTTCTCCATCCTAAGGATCTTCCTTCTGAAAGTTCTGGAGACATGGATGCACGACGAAGTTCCCGTAAGTCAAAGTTCAGAGAGGATACCGTTGTTGGCCGATTTGTTGGCTCCACCATTTTGGACGAGCCAGTGGCAGAAAATGTTTGCCACCATGGTTTAGTAGACCCGACAATCAACATGAAGGAAGCTATGAATGACATAAATAACATGTTTGGGAAACCAATGGATTTTGTTAGGCGGAAAAGATCGACAAAGAAGGAAAAGGCGCCTGAGAGCAATAGCAGAAAAGAGATTGGTGGGTTTTCAATTCTTGTTGATGATGACTTGGAACATAAAAAATGTCCACAACCTCCAAAACCAGCAGGAAAGTCAAAGTATTCTGATTTTTTTGAGCCAACTCTCCTCACTAAGGAGGCAATGGACGACATAAACAACATGTTCAATGTGCCTTTGAATTTTTAA 1575 0.4311 MASQDLSSSLVTDIETYSGKDPLLPWLRGIRKMKDTLPPAALNEKLPKFLQKCAQTFETDRRYRNDMRYLRIWLHLMDFVDDPLSLLKTMEVNHIGTKRCQFYQAYALYYEKKKRYEEAEKMYHLGVKNLAEPLDDLQKSYEQFLGRMERKKNKKIQQQEGRASRRPLSTKNMPPHFNKTEGKSEASGIESGHVGPQIASSVGKDLSDERLVETKKDQGRRFCDEPTVVGKFVGTALVGRSEAENACHHGLLDPTINMKEAMNAINSMFQEPLEDVSIAKKSHKDRSKEDHFAQKGLEVFIDESSDKIKPSASSSLRHNTEAGQSHQEPLQIYIDDEGCSETSDINDEQRDVQNLSGDFTSSASRLDAFVFLHPKDLPSESSGDMDARRSSRKSKFREDTVVGRFVGSTILDEPVAENVCHHGLVDPTINMKEAMNDINNMFGKPMDFVRRKRSTKKEKAPESNSRKEIGGFSILVDDDLEHKKCPQPPKPAGKSKYSDFFEPTLLTKEAMDDINNMFNVPLNF 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01378 524 Gene3D - 8 165 - -
Accr3g01378 524 SMART mad3_bub1_i 3 127 IPR013212 -
Accr3g01378 524 MobiDBLite consensus disorder prediction 307 327 - -
Accr3g01378 524 FunFam Mad3/BUB1 homology region 1 9 166 - -
Accr3g01378 524 ProSiteProfiles BUB1 N-terminal domain profile. 10 167 IPR013212 -
Accr3g01378 524 MobiDBLite consensus disorder prediction 162 177 - -
Accr3g01378 524 Pfam Mad3/BUB1 homology region 1 11 127 IPR013212 -
Accr3g01378 524 Coils Coil 134 154 - -
Accr3g01378 524 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 8 524 IPR015661 GO:0007094
Accr3g01378 524 MobiDBLite consensus disorder prediction 149 191 - -
Accr3g01378 524 MobiDBLite consensus disorder prediction 304 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01378 Accr-Chr3 15540787 15543360 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01378 - - gmx:100783816 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01378 3 15540787 15543360 Accr3g01378 3 15540787 15543360 ECH