Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01047 ATGGCTCTCCCTCAGCACCACCTCCAACAACACTACCAAACCCAACCACTTCAACCACAATCAAAATCATTCAGAGCTTTGCAGACAGCAGATGGTCAGATGTCGCAGCCAGTTGCCTTCTATGATCCAGCTGATTTGCAAGATCAGGACGAGCATCCTCCCTATGTTCCTCCTTTTCACGTTGTTGGGTTTGCGCCCGGTCCATTTCCTCCTGCTGACGGTAGTGATGGTGGAGCTGATTTGCAATGGAATTACGGGTTGGAACCCGAGAGGAAAAAAATTAAAGAACAGGATTTTCTGGAGAACAATTCTCAGATTTCTTCTATAGATTTCCTCCAAACTCGATCGGTCTCCACTGGATTGGGTTTGTCACTTGACAATACCCGCATGGCTTCCACTGGAGACTCGGCTTTGCTATCACTCATTGGTGATGATATTGAGCGTGAATTACAGCAGCAGGACGCAGAAATACAAAAATATCTCAGAGTGCAGGGTGAACGATTGCGGCAATCAATCATGGAGAAGGTTCAAGCAACTCAACTTCAGAGCATATCACTTGTTGAAGACAAAGTCCTACAAAAACTTAATGAGAAAGAAGCAGAGGTTGAAAGCATCAATAAGAGGAACATGGAACTTGAAGAGCGAATGGAACAGTTGACAGTTGAAGCGAGCGCTTGGCAACAACGTGCCAGATACAATGAGAACATGATTGCTGCTCTCAAGTACAATCTTCAGCAAGTATATGCTCAAGGAAGAGACAGCAAAGAAGGATGTGGTGACAGCGAGGTGGATGATACGGCTTCATGCTGCAATGGCCGTTCCATTGATTTTCATCTGCTCTCCAGGGACAACAATGATATGAAAGAGATGATGACTTGTAAGGTATGCAGAGTCAATGAAGTCAGCATGCTTTTATTACCATGCAAACACCTCTGCCTTTGTAAAGATTGCGAGAGTAAGCTTAGTTTCTGCCCCTTGTGTCAATCCTCAAAATTTATTGGCATGGAGGTCTATATGTAA 1020 0.4451 MALPQHHLQQHYQTQPLQPQSKSFRALQTADGQMSQPVAFYDPADLQDQDEHPPYVPPFHVVGFAPGPFPPADGSDGGADLQWNYGLEPERKKIKEQDFLENNSQISSIDFLQTRSVSTGLGLSLDNTRMASTGDSALLSLIGDDIERELQQQDAEIQKYLRVQGERLRQSIMEKVQATQLQSISLVEDKVLQKLNEKEAEVESINKRNMELEERMEQLTVEASAWQQRARYNENMIAALKYNLQQVYAQGRDSKEGCGDSEVDDTASCCNGRSIDFHLLSRDNNDMKEMMTCKVCRVNEVSMLLLPCKHLCLCKDCESKLSFCPLCQSSKFIGMEVYM 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01047 339 Coils Coil 188 229 - -
Accr3g01047 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 279 339 IPR013083 -
Accr3g01047 339 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 93 337 IPR017066 -
Accr3g01047 339 MobiDBLite consensus disorder prediction 1 29 - -
Accr3g01047 339 CDD mRING-HC-C3HC5_CGRF1-like 292 327 - -
Accr3g01047 339 MobiDBLite consensus disorder prediction 7 29 - -
Accr3g01047 339 Pfam Zinc finger, C3HC4 type (RING finger) 291 329 - -
Accr3g01047 339 ProSiteProfiles Zinc finger RING-type profile. 293 328 IPR001841 -
Accr3g01047 339 PIRSF SBP1_RNase_bind 5 339 IPR017066 -
Accr3g01047 339 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 274 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01047 Accr-Chr3 11822000 11825817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01047 293 329 Miscellaneous Gene Families AT2G21380 48.649 1.05e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01047 K19042 - gmx:100811918 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01047 3 11822000 11825817 Accr3g01047 3 11822000 11825817 ECH