Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01017 ATGGGCCAGGCTGCTTCCGCTGCTGCAATCCCTTGCCGTCGCCAAACCAGTCACAGCCACCGCTCCACGTCCAAATCCAGATCAACTCCTTTCATCTCTCCTATGCTTTTCAATGGACGACACGAGTCCCCAAATGAGGCCATCCAATCAGTGCCTGACTACACCTCTGAGCTTCCCGACGAGTGTTTGGCTTGCATTTTTCAGTCATTAAACTCCGCCGACCGTAATCGCTGTTCCCTCGTGTGCCGGCGGTGGCTCCAGGTCGAGGGGCAGAGTCGTCACCGTATCTCCCTGAACGCCCAATCAGATCTTCTCCTGCTTATCCCTTCTCTTTTCACACGTTTCGATTCCGTCACGAAGCTCGCTTTGAAGTGCGACCGTAGATCCGTTAGCATTGGGGACGAAGCGCTCGTTATTATCTCTCAACGATGCCCCAATCTCACCCGTCTGAAACTCCGTGCCTGCCGTGAACTGACGGATGCTGGCATGGAGGTCTTTGCTAAGAATTGCAGGGGTTTGAAGAAACTTTCCTGTGGATCTTGCACTTTTGGAGCCCGAGGGATGAATGCATTGCTCAATCATTGCGCCTCTATAGAAGAATTATCTATCAAGCGACTCAGGGGAACTACCGATGTGGCATCGGTGGAGTCTATTGGACCTGGTGTTGCAGCGTCATCACTCAAAACTATTTGTTTAAAAGAGCTATATAATGGACAATTTTTTGGGCCACTTATTCTTGGCTCGAAGAATTTAAGGACTTTGAAAATTTTCAGGTGCTCTGGCGATTGGGACAGACTTTTTCAACTCCTAGCGGATCGAGTTCCAAATATAGTCGAAGTCCACCTTGAGAGGCTCCAAACAAGTGATGTTGGCTTAGAGGCAATCTCGAATTGCTCGGGTCTGGAAGTTTTGCATCTTGTCAAGACTCCAGAGTGCACAGATTTGGGGCTTACGGCAGTTGCAGAACAATGTAGGCTCTTAAGGAAACTTCATATTGACGGGTGGAAGACGAATCGAATAGGAGATGAAGGTCTAATAGCAGTCGCTAAATATTGCCCTTATCTTCAGGAATTGGTCCTTATTGGTGTCAATCCCACTAATGCAAGTTTGGAAATGTTGGCATCCAATTGCCTGAATCTAGAGCGGTTGGCGTTATGTGGGAGTGAAACAGTTGGTGATGTTGAAATATCGTGCATTGCAGCCAAATGCTTAGCATTGAAGAAACTCTGTATTAAGAGCTGCCCTGTATCTGACCATGGTATAAAAGCACTCGCAGCTGGTTGCCCGAATTTGCTGAAAGTGAAGGTTAAGAAGTGCTCGAGTGTGACATCTGAGGGTGCAGATTGGCTGAGGCTGTTCAGGGAATCGCTTGCTGTAAATTTAGATGCAGGGGAAACGGATCATCAGGACGCAAGTGCTAGTGATGGTGGAGCTCAAGAAAATGGCCTAGAAATTCCTTCAATCCCCAGCCAGGCAGCAGCCTCTGCCAACAATGCATCAAGCAGTACAGGTCGATCAAGTCCTTTTACGTCATGGCTCGGGCTTTTCTCTGGGAAAAGCTACGTAGCCTGCACTTTGAGAAAATTGTCTGGTGGTAACCGTAGTTCATGA 1611 0.4823 MGQAASAAAIPCRRQTSHSHRSTSKSRSTPFISPMLFNGRHESPNEAIQSVPDYTSELPDECLACIFQSLNSADRNRCSLVCRRWLQVEGQSRHRISLNAQSDLLLLIPSLFTRFDSVTKLALKCDRRSVSIGDEALVIISQRCPNLTRLKLRACRELTDAGMEVFAKNCRGLKKLSCGSCTFGARGMNALLNHCASIEELSIKRLRGTTDVASVESIGPGVAASSLKTICLKELYNGQFFGPLILGSKNLRTLKIFRCSGDWDRLFQLLADRVPNIVEVHLERLQTSDVGLEAISNCSGLEVLHLVKTPECTDLGLTAVAEQCRLLRKLHIDGWKTNRIGDEGLIAVAKYCPYLQELVLIGVNPTNASLEMLASNCLNLERLALCGSETVGDVEISCIAAKCLALKKLCIKSCPVSDHGIKALAAGCPNLLKVKVKKCSSVTSEGADWLRLFRESLAVNLDAGETDHQDASASDGGAQENGLEIPSIPSQAAASANNASSSTGRSSPFTSWLGLFSGKSYVACTLRKLSGGNRSS 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01017 536 FunFam F-box protein SKIP2 90 471 - -
Accr3g01017 536 Gene3D Ribonuclease Inhibitor 213 480 IPR032675 -
Accr3g01017 536 SMART fbox_2 58 98 IPR001810 GO:0005515
Accr3g01017 536 CDD F-box_AtTIR1-like 56 93 - -
Accr3g01017 536 SMART LRR_CC_2 298 323 IPR006553 -
Accr3g01017 536 SMART LRR_CC_2 377 402 IPR006553 -
Accr3g01017 536 SMART LRR_CC_2 195 221 IPR006553 -
Accr3g01017 536 SMART LRR_CC_2 324 351 IPR006553 -
Accr3g01017 536 SMART LRR_CC_2 144 169 IPR006553 -
Accr3g01017 536 SMART LRR_CC_2 170 194 IPR006553 -
Accr3g01017 536 SMART LRR_CC_2 403 427 IPR006553 -
Accr3g01017 536 SMART LRR_CC_2 352 376 IPR006553 -
Accr3g01017 536 FunFam F-box/LRR-repeat protein 3 isoform X1 54 94 - -
Accr3g01017 536 Gene3D - 54 93 - -
Accr3g01017 536 ProSiteProfiles F-box domain profile. 52 88 IPR001810 GO:0005515
Accr3g01017 536 PANTHER UNCHARACTERIZED 56 462 - -
Accr3g01017 536 SUPERFAMILY RNI-like 99 462 - -
Accr3g01017 536 SUPERFAMILY F-box domain 40 88 IPR036047 GO:0005515
Accr3g01017 536 Pfam F-box domain 56 87 IPR001810 GO:0005515
Accr3g01017 536 MobiDBLite consensus disorder prediction 10 30 - -
Accr3g01017 536 Gene3D Ribonuclease Inhibitor 102 212 IPR032675 -
Accr3g01017 536 MobiDBLite consensus disorder prediction 1 30 - -
Accr3g01017 536 Pfam Leucine Rich repeat 144 167 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01017 Accr-Chr3 11458714 11460324 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01017 - - mnt:21392241 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01017 3 11458714 11460324 Accr3g01017 3 11458714 11460324 ECH