Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01000 ATGGCGTCGAGTTTCGATCGATGGGAAAAAGATCCTTTCTTTACGGCGGCTGAAGAGGTTCAGGAATCTGCAGACAGGATGGAATCTACTTACCGGACATGGACGCACGCCAAAAACGATGCCTCTAGTAGCTGGGATTCTGAGGAACTCCGCAGAGATCTGCAAACTTCTCTCGGCACTGCAAAATGGCAGTTAGAGGAATTTGAACGGGCAGTTAATACAAGTTATGGCAAAATCTCAAGCGATGAAGCACGGAATAGGCACCACGATTTTATAGCTGCCATTCAGGAAAATGTTAGAAAAGTAGAGAAGTCTTTGCAGGAATCTACTGTCTCAGATGGCAAGGCACCTCTGCCTTGGTTGCGTCTGAATGAAGGAGAACGGAATGAGCTCGCATTATTTCTTTCAGGAACCCCTAAAAAAAGTAAAGGTAGGGACAATGAGTGTAAACAATTAAGTGATAAAGATTCAGGTAGTATTTCAAAAAATCCACTTTCATCTGAATGGAAGCCCTCGGAAACAAAGGAACAGAGTTCACATGGGCATCGTAGGATAGCTAGTGCTAGTGCCGATTTTAGTTCATGGAAGATTGCAGTGTCTGATGATGTCCAACCATATAGTTCTTCCAATGGATCTTCTGGTCTTGTGCACAAGGTTCCCAGTTTTTCAGGATTTTTTAATTCCATGGAATCTGTTCCTGAGATCAAGTGGCCTAAGAATGCATTTAGAAAACTAAAAGCTTTGGATAATAATCAAGGAGCTGACGGTGCATTGCTGCCATCATCAGAATTGAACAGGGGCATCAGTGTGTGCTATGAAAGAAGTAAGAGTTACCTTGATAGTGATGATAAATGCTACGACAAGCAATTATATGGGTGGTATGGGGCTATACAAAGACAGCTTCAAAGGTCTCAGTACCTAATGCAATACAGTCGACCTGTTCTAATAGTTTTCTGGATGGTTCTTTCCCTTAGCCTGATTGTTTTAGTTGCATTCCGCGCGGTTTAG 1008 0.4276 MASSFDRWEKDPFFTAAEEVQESADRMESTYRTWTHAKNDASSSWDSEELRRDLQTSLGTAKWQLEEFERAVNTSYGKISSDEARNRHHDFIAAIQENVRKVEKSLQESTVSDGKAPLPWLRLNEGERNELALFLSGTPKKSKGRDNECKQLSDKDSGSISKNPLSSEWKPSETKEQSSHGHRRIASASADFSSWKIAVSDDVQPYSSSNGSSGLVHKVPSFSGFFNSMESVPEIKWPKNAFRKLKALDNNQGADGALLPSSELNRGISVCYERSKSYLDSDDKCYDKQLYGWYGAIQRQLQRSQYLMQYSRPVLIVFWMVLSLSLIVLVAFRAV 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01000 335 Gene3D - 9 110 - -
Accr3g01000 335 CDD SNARE_NTD_STX6-like 11 106 - -
Accr3g01000 335 MobiDBLite consensus disorder prediction 135 185 - -
Accr3g01000 335 PANTHER OS05G0443700 PROTEIN 1 327 - -
Accr3g01000 335 MobiDBLite consensus disorder prediction 156 172 - -
Accr3g01000 335 MobiDBLite consensus disorder prediction 141 155 - -
Accr3g01000 335 Pfam Syntaxin 6, N-terminal 11 103 IPR015260 GO:0016020|GO:0048193
Accr3g01000 335 FunFam Syntaxin 10 8 109 - -
Accr3g01000 335 SUPERFAMILY t-snare proteins 10 108 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01000 Accr-Chr3 11193322 11196174 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01000 - - tcc:18592011 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g01000 3 11193322 11196174 Accr3g01000 3 11193322 11196174 ECH